RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ZNF787Q6DD87 383 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 ADGRD2Q7Z7M1 963 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 CDR2LQ86X02 465 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 THNSL1Q8IYQ7 743 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 ABI1Q8IZP0 508 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 COLGALT1Q8NBJ5 622 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 IL27Q8NEV9 243 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 POF1BQ8WVV4 589 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 TCP11Q8WWU5 503 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 CPB2Q96IY4 423 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 POLR3CQ9BUI4 534 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 INO80BQ9C086 356 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 POLR3FQ9H1D9 316 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 NSUN3Q9H649 340 aaKnown RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 IGFLR1Q9H665 355 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 ELAC1Q9H777 363 aaKnown RBP6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 TUFT1Q9NNX1 390 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 AGPAT5Q9NUQ2 364 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 FAM105AQ9NUU6 356 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 DACT1Q9NYF0 836 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 LRWD1Q9UFC0 647 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 COG5Q9UP83 839 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 INPP5FQ9Y2H2 1132 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 KIF3AQ9Y496 699 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 PPME1Q9Y570 386 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 GTF3C3Q9Y5Q9 886 aa6.41□□□□□ -1.38
HMGB1P20-201ENST00000402555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ARHGEF35A5YM69 484 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 FAM187AA6NFU0 413 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 LRRIQ4A6NIV6 560 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 NT5C1B-RDH14C9J2C7 533 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 E9PMD0 336 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 INO80B-WBP1J3KQ70 363 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 LINC01565O15544 149 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ASAP2O43150 1006 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 B4GALT5O43286 388 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 HOXA2O43364 376 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 B4GALT3O60512 393 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 TSPAN1O60635 241 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 FGF18O76093 207 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 EOMESO95936 686 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 LAG3P18627 525 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 RPA1P27694 616 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 HOXA11P31270 313 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ARL2P36404 184 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 AFF1P51825 1210 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 PTENP60484 403 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ERVFC1P60507 584 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 RBM10P98175 930 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 MBTD1Q05BQ5 628 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 DLX2Q07687 328 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 HYAL1Q12794 435 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 MXD4Q14582 209 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZRSR1Q15695 479 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 CLUL1Q15846 466 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 AMHR2Q16671 573 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 UBXN11Q5T124 520 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 KCNT2Q6UVM3 1135 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 AGMOQ6ZNB7 445 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 KCNK18Q7Z418 384 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 SRGAP1Q7Z6B7 1085 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 RBM23Q86U06 439 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 EXOC8Q8IYI6 725 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 LRRC43Q8N309 656 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ERMNQ8TAM6 284 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 SNX29Q8TEQ0 813 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 BSNDQ8WZ55 320 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 P2RX5Q93086 422 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZNF558Q96NG5 402 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 NACC1Q96RE7 527 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 UHRF1Q96T88 793 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 EIF2AQ9BY44 585 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 GBP3Q9H0R5 595 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 LMAN2LQ9H0V9 348 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 BHMT2Q9H2M3 363 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 CHST12Q9NRB3 414 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 AAASQ9NRG9 546 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 DDX19AQ9NUU7 478 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 CLDND1Q9NY35 253 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 DBR1Q9UK59 544 aaKnown RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 KIAA1024Q9UPX6 916 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 USP20Q9Y2K6 914 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 PCDHB2Q9Y5E7 798 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 PCDHB12Q9Y5F1 795 aa6.4□□□□□ -1.38
HMGB1P20-201ENST00000402555 C5orf42Q9H799 3197 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 MUC3AQ02505 3323 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 VPS37CA5D8V6 355 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 VWA3AA6NCI4 1184 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 PER2O15055 1255 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 ZC3H11AO75152 810 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 ERLIN2O94905 339 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 EDN1P05305 212 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 XRCC6P12956 609 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 IL9P15248 144 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 ARF4P18085 180 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 LIG1P18858 919 aa6.39□□□□□ -1.39
HMGB1P20-201ENST00000402555 CYP11B2P19099 503 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms