RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 RABGAP1LQ5R372 815 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 TMEM154Q6P9G4 183 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 POTEBQ6S5H4 581 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 PPM1NQ8N819 430 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 ASNSD1Q9NWL6 643 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 NXF1Q9UBU9 619 aaKnown RBP18.27■□□□□ 0.52
SIN3A-203ENST00000394949 MINPP1Q9UNW1 487 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 ARHGEF40Q8TER5 1519 aa18.27■□□□□ 0.51
SIN3A-203ENST00000394949 SFI1A8K8P3 1242 aa18.27■□□□□ 0.51
SIN3A-203ENST00000394949 CD58P19256 250 aa18.27■□□□□ 0.51
SIN3A-203ENST00000394949 PRELPP51888 382 aa18.27■□□□□ 0.51
SIN3A-203ENST00000394949 DCP1AQ9NPI6 582 aaPredicted RBP18.27■□□□□ 0.51
SIN3A-203ENST00000394949 ZNF335Q9H4Z2 1342 aaPredicted RBP18.27■□□□□ 0.51
SIN3A-203ENST00000394949 TBXAS1P24557 533 aaPredicted RBP18.26■□□□□ 0.51
SIN3A-203ENST00000394949 TRIM67Q6ZTA4 783 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 PCDHA6Q9UN73 950 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 PCDHA8Q9Y5H6 950 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.26■□□□□ 0.51
SIN3A-203ENST00000394949 MYO3BQ8WXR4 1341 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 NRKQ7Z2Y5 1582 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 PAPD7Q5XG87 772 aaKnown RBP18.26■□□□□ 0.51
SIN3A-203ENST00000394949 RNF25Q96BH1 459 aaPredicted RBP18.26■□□□□ 0.51
SIN3A-203ENST00000394949 TRIM51Q9BSJ1 452 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 STK33Q9BYT3 514 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 SNX25Q9H3E2 840 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 IRAK4Q9NWZ3 460 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 SYNJ2BP-COX16A0A087WUM0 186 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 ASAP2O43150 1006 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 PCYT1AP49585 367 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 PEX3P56589 373 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 MTERF2Q49AM1 385 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 PRPF31Q8WWY3 499 aaKnown RBP18.26■□□□□ 0.51
SIN3A-203ENST00000394949 ATP6V1E2Q96A05 226 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 ERP27Q96DN0 273 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 C11orf70Q9BRQ4 267 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 COX16Q9P0S2 106 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 FIS1Q9Y3D6 152 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 ANGPTL3Q9Y5C1 460 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 CTDNEP1O95476 244 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 JAK3P52333 1124 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 MORF4L2Q15014 288 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 METTL23Q86XA0 190 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 C1orf54Q8WWF1 131 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 ERP44Q9BS26 406 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 EHD2Q9NZN4 543 aa18.26■□□□□ 0.51
SIN3A-203ENST00000394949 CRB1P82279 1406 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 USP11P51784 963 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 RC3H1Q5TC82 1133 aaKnown RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 COL23A1Q86Y22 540 aaPredicted RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 ANKS1AQ92625 1134 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 ING2Q9H160 280 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 SUN2Q9UH99 717 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 SNX5Q9Y5X3 404 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 SLC4A7Q9Y6M7 1214 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 CROCC2H7BZ55 1655 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 GLI2P10070 1586 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 AP1B1Q10567 949 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 TRIM28Q13263 835 aaKnown RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 CCDC92Q53HC0 331 aaPredicted RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 JAMLQ86YT9 394 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 PIGOQ8TEQ8 1089 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 DNAJC7Q99615 494 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 MSTO1Q9BUK6 570 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 CD209Q9NNX6 404 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 WARS2Q9UGM6 360 aaKnown RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 EIF4E1BA6NMX2 242 aaKnown RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 GH2P01242 217 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 ACADSP16219 412 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 GALCP54803 685 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 FBXL13Q8NEE6 735 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 MCPH1Q8NEM0 835 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 OR2W6PQ8NHA6 318 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 HSPH1Q92598 858 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 SUCLA2Q9P2R7 463 aaPredicted RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 KITP10721 976 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 EIF2AK2P19525 551 aaKnown RBP18.25■□□□□ 0.51
SIN3A-203ENST00000394949 HDAC4P56524 1084 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 TAP1Q03518 808 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 HIF1AQ16665 826 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 EDRF1Q3B7T1 1238 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 MIGA2Q7L4E1 593 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 PDP2Q9P2J9 529 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
SIN3A-203ENST00000394949 K7ERI5 159 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 IGF2BP3O00425 579 aaKnown RBP eCLIP18.24■□□□□ 0.51
SIN3A-203ENST00000394949 SMARCA1P28370 1054 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 PRDX5P30044 214 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 POLR3CQ9BUI4 534 aaPredicted RBP18.24■□□□□ 0.51
SIN3A-203ENST00000394949 RNF103-CHMP3A0A140T963 221 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 PPP1R3GB7ZBB8 358 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 GOLGA8MH3BSY2 632 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 MAN1A2O60476 641 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 MAPRE2Q15555 327 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 PADI6Q6TGC4 694 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 SLC35G2Q8TBE7 412 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 RAB21Q9UL25 225 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 TMEM120BA0PK00 339 aa18.24■□□□□ 0.51
SIN3A-203ENST00000394949 USP17L5A8MUK1 530 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms