RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SLC16A3O15427 465 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 HOXA10P31260 410 aaPredicted RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 PPM1FP49593 454 aaPredicted RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 MDM2Q00987 491 aaPredicted RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 GUCY1A3Q02108 690 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 STAT4Q14765 748 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 JADE1Q6IE81 842 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L6PQ6QN14 398 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 GLYCTKQ8IVS8 523 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 PPWD1Q96BP3 646 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 CENPKQ9BS16 269 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 DNAJC17Q9NVM6 304 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 NXF1Q9UBU9 619 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 PFDN1O60925 122 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 HAUS5O94927 633 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 ASNSP08243 561 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 SAT1P21673 171 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 TMPRSS15P98073 1019 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 OR6B2Q6IFH4 312 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 USP49Q70CQ1 688 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 RAB44Q7Z6P3 723 aaPredicted RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 RHOT1Q8IXI2 618 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 CCNYQ8ND76 341 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 SYN2Q92777 582 aaPredicted RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 SNF8Q96H20 258 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 FAM84BQ96KN1 310 aaPredicted RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 SLC38A10Q9HBR0 1119 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 ETNK1Q9HBU6 452 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 AGPAT5Q9NUQ2 364 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 PCNTO95613 3336 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 PDS5AQ29RF7 1337 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 A0A0G2JND7 137 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 WDR64B1ANS9 1081 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 SPAG7O75391 227 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 DNAJC8O75937 253 aaPredicted RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 TDP2O95551 362 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 EYA4O95677 639 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 HSPA8P11142 646 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 TBXAS1P24557 533 aaPredicted RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 POLE2P56282 527 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 KRT76Q01546 638 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 ZNF211Q13398 564 aaPredicted RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 MTERF2Q49AM1 385 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 KIAA1755Q5JYT7 1200 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 PDXDC2PQ6P474 469 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 KCTD17Q8N5Z5 321 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 MAML1Q92585 1016 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 HDAC11Q96DB2 347 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 PAGR1Q9BTK6 254 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 MSTO1Q9BUK6 570 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 NUP85Q9BW27 656 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 CPVLQ9H3G5 476 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 BATF3Q9NR55 127 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 PPARGC1AQ9UBK2 798 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 ZFP69BQ9UJL9 534 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 P4HBP07237 508 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 PSMA2P25787 234 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 HSPA9P38646 679 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 TRMT10CQ7L0Y3 403 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 SLC44A5Q8NCS7 719 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 ZNF473Q8WTR7 871 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 TGS1Q96RS0 853 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 FUT8Q9BYC5 575 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 FOXP3Q9BZS1 431 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 TMEM260Q9NX78 707 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 HPSEQ9Y251 543 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 ARL2BPQ9Y2Y0 163 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 LRRC37AA6NMS7 1700 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 POTEFA5A3E0 1075 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 KRT7P08729 469 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 POTEIP0CG38 1075 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 HDLBPQ00341 1268 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 IFRD2Q12894 506 aaPredicted RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 MYO1EQ12965 1108 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 ART3Q13508 389 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 PTPAQ15257 358 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 QRICH1Q2TAL8 776 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 FSCBQ5H9T9 825 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 POTEGQ6S5H5 508 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 POTEEQ6S8J3 1075 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 NOA1Q8NC60 698 aaKnown RBP8.94□□□□□ -0.98
VPS36-201ENST00000378060 CRAMP1Q96RY5 1269 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 TRAIPQ9BWF2 469 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 STK33Q9BYT3 514 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 KCNQ5Q9NR82 932 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 TAF6LQ9Y6J9 622 aa8.94□□□□□ -0.98
VPS36-201ENST00000378060 USP17L10C9JJH3 530 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 ZNF185O15231 689 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 KIF1CO43896 1103 aaKnown RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 SFNP31947 248 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 LSP1P33241 339 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 CA8P35219 290 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 STK4Q13043 487 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 KCTD2Q14681 263 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 NAB2Q15742 525 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 ZNF667Q5HYK9 610 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 KRT80Q6KB66 452 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 BBS5Q8N3I7 341 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms