RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 ARHGAP25P42331 645 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 EFCAB12Q6NXP0 572 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 SMIM5Q71RC9 77 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 PHLDB2Q86SQ0 1253 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 CDC23Q9UJX2 597 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 ANAPC7Q9UJX3 599 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 RPS6P62753 249 aaKnown RBP10.5□□□□□ -0.73
SCAF11-202ENST00000369367 DYNLT1P63172 113 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 PDIA6Q15084 440 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 PRAMEF18Q5VWM3 479 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 CABS1Q96KC9 395 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
SCAF11-202ENST00000369367 CLTAP09496 248 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 CAV1Q03135 178 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 KRT31Q15323 416 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 SLFNL1Q499Z3 407 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 ACCSLQ4AC99 568 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 TRIM54Q9BYV2 358 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 SH3BP1Q9Y3L3 701 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 LRG1P02750 347 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 IL9RQ01113 521 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 EXOSC10Q01780 885 aaKnown RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 ATF7IP2Q5U623 682 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 CDKL3Q8IVW4 592 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 ZC3H4Q9UPT8 1303 aaKnown RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 EGFRP00533 1210 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 JADE1Q6IE81 842 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 CHMP6Q96FZ7 201 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 OGFRQ9NZT2 677 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 AGAP1Q9UPQ3 857 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 PPP1R12AO14974 1030 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 PSMD3O43242 534 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 TMCC1O94876 653 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 UPP2O95045 317 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 NOGQ13253 232 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 ZNF235Q14590 738 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 VSTM4Q8IW00 320 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 LRRC8CQ8TDW0 803 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 HSPH1Q92598 858 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 TSSK1BQ9BXA7 367 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 PCDHA13Q9Y5I0 950 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 MEGF6O75095 1541 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 TMEM247A6NEH6 219 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 EIF3DO15371 548 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 CABYRO75952 493 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 KIAA1683Q9H0B3 1180 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 NOP9Q86U38 636 aaKnown RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 TBC1D19Q8N5T2 526 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 ZKSCAN4Q969J2 545 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 SDCCAG3Q96C92 435 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 JMJD4Q9H9V9 463 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 UBQLN1Q9UMX0 589 aaKnown RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 MAGED2Q9UNF1 606 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-202ENST00000369367 ZMYM2Q9UBW7 1377 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
SCAF11-202ENST00000369367 IFNA8P32881 189 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ADAT2Q7Z6V5 191 aaKnown RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 IGDCC4Q8TDY8 1250 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 UCMAQ8WVF2 138 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 PHF20Q9BVI0 1012 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 MRIQ9BWK5 157 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 PARVAQ9NVD7 372 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 DDNO94850 711 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 NDUFA10O95299 355 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ADORA2BP29275 332 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ZNF512Q96ME7 567 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 BPIFA3Q9BQP9 254 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 SPON2Q9BUD6 331 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 POLR3CQ9BUI4 534 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 VTA1Q9NP79 307 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 KANSL3Q9P2N6 904 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 COBLO75128 1261 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 THPOP40225 353 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 MNAT1P51948 309 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ANO4Q32M45 955 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 WDR72Q3MJ13 1102 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ARHGEF2Q92974 986 aaKnown RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 INTS2Q9H0H0 1204 aaKnown RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 HMX1Q9NP08 348 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 IQANK1A0A1B0GTG1 560 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 CLGNO14967 610 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 GUCY2FP51841 1108 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 RPUSD2Q8IZ73 545 aaKnown RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ANKRD42Q8N9B4 389 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ASAP3Q8TDY4 903 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 SMYD2Q9NRG4 433 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 DSEQ9UL01 958 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 PTPN22Q9Y2R2 807 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 VWDEQ8N2E2 1590 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 CCDC151A5D8V7 595 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 ODC1P11926 461 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 RPA1P27694 616 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 OR1G1P47890 313 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 RAB27AP51159 221 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 MTG1Q9BT17 334 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 SAMSN1Q9NSI8 373 aaKnown RBP10.48□□□□□ -0.73
SCAF11-202ENST00000369367 KDM1AO60341 852 aa10.48□□□□□ -0.73
SCAF11-202ENST00000369367 AKR1A1P14550 325 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms