RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 KITP10721 976 aa17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 RARGP13631 454 aa17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 ACADSP16219 412 aa17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 RABGAP1LQ5R372 815 aa17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 RBM17Q96I25 401 aaKnown RBP17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 ZNF577Q9BSK1 485 aa17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 SEMA4AQ9H3S1 761 aa17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 BSDC1Q9NW68 430 aaPredicted RBP17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 PPLO60437 1756 aa17.02■□□□□ 0.31
CLSTN1-201ENST00000361311 GMNNO75496 209 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 KRT19P08727 400 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 LAMB3Q13751 1172 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 CRELD2Q6UXH1 353 aaPredicted RBP17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 MROH1Q8NDA8 1641 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 RCN1Q15293 331 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 LRRC36Q1X8D7 754 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 HIC2Q96JB3 615 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 RXFP1Q9HBX9 757 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 EPS15L1Q9UBC2 864 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 CFLARO15519 480 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 LPXNO60711 386 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 COMTP21964 271 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 ANKRD27Q96NW4 1050 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 ANLNQ9NQW6 1124 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 ADAM22Q9P0K1 906 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 GOLGA8RI6L899 631 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 KDSRQ06136 332 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 ANO5Q75V66 913 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 CCDC124Q96CT7 223 aaKnown RBP17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 C18orf8Q96DM3 657 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 DCLRE1BQ9H816 532 aa17.01■□□□□ 0.31
CLSTN1-201ENST00000361311 RFX1P22670 979 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 PPP2R5CQ13362 524 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 SEC23AQ15436 765 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 TRIM56Q9BRZ2 755 aaKnown RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 PDP2Q9P2J9 529 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 G3BP2Q9UN86 482 aaKnown RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 ARHGAP10A1A4S6 786 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 RTN2O75298 545 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 COILP38432 576 aaPredicted RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 DNAAF5Q86Y56 855 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 SPATA20Q8TB22 786 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 PRCCQ92733 491 aaPredicted RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 CFAP36Q96G28 342 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 RBM41Q96IZ5 413 aaKnown RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 SERPINI1Q99574 410 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 ABCF3Q9NUQ8 709 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 MAGEA13PA6NCF6 341 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 FOXP2O15409 715 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 MX2P20592 715 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 SYDE1Q6ZW31 735 aaPredicted RBP17■□□□□ 0.31
CLSTN1-201ENST00000361311 XXYLT1Q8NBI6 393 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 TTC16Q8NEE8 873 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 CALN1Q9BXU9 219 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 CAPN9O14815 690 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 GSTA2P09210 222 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 CYFIP1Q7L576 1253 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 ICA1LQ8NDH6 482 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 CHURC1Q8WUH1 139 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 APEX2Q9UBZ4 518 aa17■□□□□ 0.31
CLSTN1-201ENST00000361311 ZBTB5O15062 677 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 ENO1P06733 434 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 POLD1P28340 1107 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 MMEL1Q495T6 779 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 ZNF571Q7Z3V5 609 aaPredicted RBP16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 EIF1ADQ8N9N8 165 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 ATP11CQ8NB49 1132 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 LOC102724428A0A0B4J2F2 783 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 FMO5P49326 533 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 ITGA8P53708 1063 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 SIK1P57059 783 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 C11orf70Q9BRQ4 267 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 TSSK1BQ9BXA7 367 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 CYP4F11Q9HBI6 524 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 PHTF1Q9UMS5 762 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 ZNF711Q9Y462 761 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 SCINQ9Y6U3 715 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 EMSYQ7Z589 1322 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 PHEXP78562 749 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 DARS2Q6PI48 645 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 RANBP17Q9H2T7 1088 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-201ENST00000361311 SLC16A3O15427 465 aaKnown RBP16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 SCNN1DP51172 638 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 VAMP7P51809 220 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 DEUP1Q05D60 604 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 C12orf60Q5U649 245 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 MAP7D3Q8IWC1 876 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 KIAA0895Q8NCT3 520 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms