RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 NOC4LQ9BVI4 516 aaKnown RBP16.04■□□□□ 0.16
CXCL12-201ENST00000343575 TARS2Q9BW92 718 aaKnown RBP16.04■□□□□ 0.16
CXCL12-201ENST00000343575 UNC93B1Q9H1C4 597 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 FZD8Q9H461 694 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 HSPBP1Q9NZL4 362 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 GTF2IRD1Q9UHL9 959 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 C17orf102A2RUQ5 167 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 ABLIM1O14639 778 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 HNRNPDLO14979 420 aaKnown RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 ZEB2O60315 1214 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 GPR32O75388 356 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 TMOD1P28289 359 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 GPC3P51654 580 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 EFNA5P52803 228 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 MTFR1Q15390 333 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 MAN2A1Q16706 1144 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 FRMD5Q7Z6J6 570 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 C7orf31Q8N865 590 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 ZNF592Q92610 1267 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 MKNK1Q9BUB5 465 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 CDHR5Q9HBB8 845 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 B4GALT5O43286 388 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 CYP2C9P11712 490 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 ABCD1P33897 745 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 NLRP11P59045 1033 aaKnown RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 TFDP1Q14186 410 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 AMHR2Q16671 573 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 CCDC40Q4G0X9 1142 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 VWA3BQ502W6 1294 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 GDF6Q6KF10 455 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 ARMCX5Q6P1M9 558 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 TMC6Q7Z403 805 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 FBXL18Q96ME1 805 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 FAM49AQ9H0Q0 323 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-201ENST00000343575 NDST4Q9H3R1 872 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 L2HGDHQ9H9P8 463 aa16.03■□□□□ 0.16
CXCL12-201ENST00000343575 ACLYP53396 1101 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 CCZ1BP86790 482 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-201ENST00000343575 TMEM62Q0P6H9 643 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 STRN3Q13033 797 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 TBX2Q13207 712 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-201ENST00000343575 ARID5BQ14865 1188 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 RNF180Q86T96 592 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 SESTD1Q86VW0 696 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 RDH13Q8NBN7 331 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 PCSK9Q8NBP7 692 aaKnown RBP16.02■□□□□ 0.16
CXCL12-201ENST00000343575 PLEKHO2Q8TD55 490 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 DNAJB3Q8WWF6 145 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 WNT8BQ93098 351 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 SLC35C1Q96A29 364 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 C2orf40Q9H1Z8 148 aa16.02■□□□□ 0.16
CXCL12-201ENST00000343575 PAK6Q9NQU5 681 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-201ENST00000343575 ARMCX3Q9UH62 379 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-201ENST00000343575 GOLGA8IPA6NC78 632 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 GOLGA8JA6NMD2 632 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 EXOC3O60645 756 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 PRKCBP05771 671 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 ADRB2P07550 413 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
CXCL12-201ENST00000343575 LIG4P49917 911 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 UBXN1Q04323 297 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 MAPK6Q16659 721 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 KIZQ2M2Z5 673 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 FILIP1LQ4L180 1135 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 CBWD2Q8IUF1 395 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 FAM186BQ8IYM0 893 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 XXYLT1Q8NBI6 393 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 SAAL1Q96ER3 474 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 ACO2Q99798 780 aaKnown RBP16.01■□□□□ 0.15
CXCL12-201ENST00000343575 PTPRHQ9HD43 1115 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 ACKR2O00590 384 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 TPM1P09493 284 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 EPB41P11171 864 aaKnown RBP16.01■□□□□ 0.15
CXCL12-201ENST00000343575 GARTP22102 1010 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 FAM187BQ17R55 369 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 C1orf220Q5T0J3 134 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 SPECC1LQ69YQ0 1117 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 ZNF410Q86VK4 478 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 POMGNT1Q8WZA1 660 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 BICD1Q96G01 975 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 INO80BQ9C086 356 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-201ENST00000343575 TSPYL1Q9H0U9 437 aa16.01■□□□□ 0.15
CXCL12-201ENST00000343575 METTL14Q9HCE5 456 aaKnown RBP16.01■□□□□ 0.15
CXCL12-201ENST00000343575 A0A0B4J269 797 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 FAM189A1O60320 539 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 MYCP01106 439 aaPredicted RBP16■□□□□ 0.15
CXCL12-201ENST00000343575 PROZP22891 400 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 PHKA2P46019 1235 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms