RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MARCH10Q8NA82 808 aaPredicted RBP17.1■□□□□ 0.33
NPHP3-201ENST00000337331 DNAJC7Q99615 494 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 SYNJ2BP-COX16A0A087WUM0 186 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 AP3B2Q13367 1082 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 HPS3Q969F9 1004 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 CALN1Q9BXU9 219 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 NUF2Q9BZD4 464 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 COX16Q9P0S2 106 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 ETS2P15036 469 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 ACADSP16219 412 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 LONRF1Q17RB8 773 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 DNAJC24Q6P3W2 148 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 TMEM179Q6ZVK1 233 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 RASSF3Q86WH2 238 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 RFX6Q8HWS3 928 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 DDX50Q9BQ39 737 aaKnown RBP17.1■□□□□ 0.33
NPHP3-201ENST00000337331 PCDHGC5Q9Y5F6 944 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 POTEIP0CG38 1075 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 PRLRP16471 622 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 CD58P19256 250 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 SAT1P21673 171 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 MARK3P27448 753 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 PDE1BQ01064 536 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 SYT2Q8N9I0 419 aaPredicted RBP17.1■□□□□ 0.33
NPHP3-201ENST00000337331 FAM149B1Q96BN6 582 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 UTYO14607 1347 aa17.1■□□□□ 0.33
NPHP3-201ENST00000337331 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 ASAP2O43150 1006 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 KRT1P04264 644 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 KLRC1P26715 233 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 TMEM237Q96Q45 408 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
NPHP3-201ENST00000337331 NDE1Q9NXR1 346 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 TACC3Q9Y6A5 838 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 EXOC1LA0A1B0GW35 172 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 RASA4BC9J798 803 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 RASA4O43374 803 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 SHBGP04278 402 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 TMED10P49755 219 aaKnown RBP17.09■□□□□ 0.33
NPHP3-201ENST00000337331 BASP1P80723 227 aaKnown RBP17.09■□□□□ 0.33
NPHP3-201ENST00000337331 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
NPHP3-201ENST00000337331 ANKRD40Q6AI12 368 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 CCDC117Q8IWD4 279 aaPredicted RBP17.09■□□□□ 0.33
NPHP3-201ENST00000337331 TRIM9Q9C026 710 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 SEPT10Q9P0V9 454 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 REXO2Q9Y3B8 237 aaKnown RBP17.09■□□□□ 0.33
NPHP3-201ENST00000337331 GCLMP48507 274 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 PEX5P50542 639 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 SNX30Q5VWJ9 437 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 STK32AQ8WU08 396 aa17.09■□□□□ 0.33
NPHP3-201ENST00000337331 BTKQ06187 659 aa17.08■□□□□ 0.33
NPHP3-201ENST00000337331 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.33
NPHP3-201ENST00000337331 ZNF570Q96NI8 536 aa17.08■□□□□ 0.33
NPHP3-201ENST00000337331 Q9H521 79 aa17.08■□□□□ 0.33
NPHP3-201ENST00000337331 RNPEPL1Q9HAU8 725 aa17.08■□□□□ 0.33
NPHP3-201ENST00000337331 PNMA3Q9UL41 463 aa17.08■□□□□ 0.33
NPHP3-201ENST00000337331 LRCH1Q9Y2L9 728 aa17.08■□□□□ 0.33
NPHP3-201ENST00000337331 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
NPHP3-201ENST00000337331 RNASELQ05823 741 aaKnown RBP17.08■□□□□ 0.32
NPHP3-201ENST00000337331 NXNQ6DKJ4 435 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.32
NPHP3-201ENST00000337331 DCLRE1BQ9H816 532 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 HNRNPRO43390 633 aaKnown RBP17.08■□□□□ 0.32
NPHP3-201ENST00000337331 ERVK-9P63128 1117 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 BBS9Q3SYG4 887 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 GADL1Q6ZQY3 521 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 SESTD1Q86VW0 696 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 ANKRD27Q96NW4 1050 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 NACA2Q9H009 215 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 ANLNQ9NQW6 1124 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.32
NPHP3-201ENST00000337331 SPAG7O75391 227 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 RIPK1Q13546 671 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 FAM160B1Q5W0V3 765 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 MAP3K14Q99558 947 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 TLR10Q9BXR5 811 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 HPS5Q9UPZ3 1129 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 TRAF3IP3Q9Y228 551 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 RTN2O75298 545 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 OSTNP61366 133 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 MED21Q13503 144 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 KNOP1Q1ED39 458 aaKnown RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 LACTB2Q53H82 288 aaPredicted RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 RINT1Q6NUQ1 792 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 EPM2AIP1Q7L775 607 aaPredicted RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 LIN7AO14910 233 aaPredicted RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 HAUS5O94927 633 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 KPNB1Q14974 876 aaKnown RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 P3H1Q32P28 736 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 C1orf146Q5VVC0 180 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms