RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 XIRP2A4UGR9 3374 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 NT5C1B-RDH14C9J2C7 533 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 FSCN2O14926 492 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 N4BP3O15049 544 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 LIG1P18858 919 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 GUCY2CP25092 1073 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 DMP1Q13316 513 aaPredicted RBP30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 PUS10Q3MIT2 529 aaKnown RBP30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 UHRF1Q96T88 793 aaPredicted RBP30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 TCF25Q9BQ70 676 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 APOL6Q9BWW8 343 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 NXF3Q9H4D5 531 aaKnown RBP30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 TLE6Q9H808 572 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 C17orf75Q9HAS0 396 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 NGRNQ9NPE2 291 aaKnown RBP30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 ENTPD7Q9NQZ7 604 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 KCND2Q9NZV8 630 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 DAXXQ9UER7 740 aaPredicted RBP30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 PCDHGC5Q9Y5F6 944 aa30.47■■■□□ 2.47
ATPAF1-201ENST00000329231 SPTBN5Q9NRC6 3674 aaKnown RBP30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 CCDC169A6NNP5 214 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 INPPL1O15357 1258 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 HSP90AA1P07900 732 aaKnown RBP30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 GALTP07902 379 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 PLA2G4BP0C869 781 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 GTF2F1P35269 517 aaKnown RBP eCLIP30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 NRIP1P48552 1158 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 AFF1P51825 1210 aaKnown RBP30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 PEX3P56589 373 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 ZNF280BQ86YH2 543 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 DAW1Q8N136 415 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 GAD1Q99259 594 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 ADPGKQ9BRR6 497 aa30.46■■■□□ 2.47
ATPAF1-201ENST00000329231 ARL5CA6NH57 179 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 H3BQ06 376 aaPredicted RBP30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 POMCP01189 267 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 NPTX2P47972 431 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 SLC12A3P55017 1021 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 ADAM15Q13444 863 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 PTPAQ15257 358 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 FAM173BQ6P4H8 233 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 RBM23Q86U06 439 aaKnown RBP30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 EFHBQ8N7U6 833 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 RASSF8Q8NHQ8 419 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 TMEM175Q9BSA9 504 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 PDZD7Q9H5P4 517 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 DNAJB4Q9UDY4 337 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 KCNG1Q9UIX4 513 aa30.45■■■□□ 2.47
ATPAF1-201ENST00000329231 CUL9Q8IWT3 2517 aa30.45■■■□□ 2.46
ATPAF1-201ENST00000329231 PHLPP2Q6ZVD8 1323 aa30.45■■■□□ 2.46
ATPAF1-201ENST00000329231 FSD2A1L4K1 749 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 TTLL13PA6NNM8 815 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 K7ERI5 159 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 LTBRP36941 435 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 MLH1P40692 756 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 GRIN1Q05586 938 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 MAPK7Q13164 816 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 BMS1Q14692 1282 aaKnown RBP30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 PLPP4Q5VZY2 271 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 TMC7Q7Z402 723 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 IGSF21Q96ID5 467 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 CDCA3Q99618 268 aaPredicted RBP30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 KMT5AQ9NQR1 393 aa30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 RBM19Q9Y4C8 960 aaKnown RBP30.44■■■□□ 2.46
ATPAF1-201ENST00000329231 DDHD2O94830 711 aa30.43■■■□□ 2.46
ATPAF1-201ENST00000329231 ALDH2P05091 517 aa30.43■■■□□ 2.46
ATPAF1-201ENST00000329231 SLC11A1P49279 550 aa30.43■■■□□ 2.46
ATPAF1-201ENST00000329231 PTCRAQ6ISU1 281 aaPredicted RBP30.43■■■□□ 2.46
ATPAF1-201ENST00000329231 PARP2Q9UGN5 583 aa30.43■■■□□ 2.46
ATPAF1-201ENST00000329231 ZMYM2Q9UBW7 1377 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 LINC01565O15544 149 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 PDIA4P13667 645 aaKnown RBP30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 AKAP5P24588 427 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 MARCKSP29966 332 aaPredicted RBP30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 NDUFV1P49821 464 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 RAD51AP2Q09MP3 1159 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 DDX53Q86TM3 631 aaKnown RBP30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 TMEM173Q86WV6 379 aaPredicted RBP30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 ZFP42Q96MM3 310 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 TMEM134Q9H6X4 195 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 FAM50BQ9Y247 325 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 FAN1Q9Y2M0 1017 aa30.42■■■□□ 2.46
ATPAF1-201ENST00000329231 PER2O15055 1255 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 B4GALT3O60512 393 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 SCNN1GP51170 649 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 CEBPZQ03701 1054 aaKnown RBP30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 SMC1AQ14683 1233 aaKnown RBP30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 KARSQ15046 597 aaKnown RBP30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 APBB1IPQ7Z5R6 666 aaPredicted RBP30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 CCSER1Q9C0I3 900 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 ARHGAP28Q9P2N2 729 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 STK39Q9UEW8 545 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 USP20Q9Y2K6 914 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 SRPRBQ9Y5M8 271 aaKnown RBP30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 TTC28Q96AY4 2481 aa30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 TCF20Q9UGU0 1960 aaKnown RBP30.41■■■□□ 2.46
ATPAF1-201ENST00000329231 GRXCR2A6NFK2 248 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 SFI1A8K8P3 1242 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 TNFRSF10AO00220 468 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms