RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 KLHDC7AQ5VTJ3 777 aa17.53■□□□□ 0.4
SFXN1-201ENST00000321442 SPATA21Q7Z572 469 aa17.53■□□□□ 0.4
SFXN1-201ENST00000321442 LRRC34Q8IZ02 419 aa17.53■□□□□ 0.4
SFXN1-201ENST00000321442 G3BP2Q9UN86 482 aaKnown RBP17.53■□□□□ 0.4
SFXN1-201ENST00000321442 ITGA4P13612 1032 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 PPP2R5CQ13362 524 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 LRIG3Q6UXM1 1119 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 FRMD5Q7Z6J6 570 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 ERP44Q9BS26 406 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 ANAPC4Q9UJX5 808 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 CFAP69A5D8W1 941 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 WNT7AO00755 349 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 CLDN3O15551 220 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 DKC1O60832 514 aaKnown RBP eCLIP17.52■□□□□ 0.4
SFXN1-201ENST00000321442 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 CERS5Q8N5B7 392 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 XXYLT1Q8NBI6 393 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 NSMCE1Q8WV22 266 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 SPON1Q9HCB6 807 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.4
SFXN1-201ENST00000321442 ALG6Q9Y672 507 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.4
SFXN1-201ENST00000321442 CFAP73A6NFT4 308 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 OSTNP61366 133 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 COG7P83436 770 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 KRT17Q04695 432 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 GRB10Q13322 594 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 KRT81Q14533 505 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 CENPPQ6IPU0 288 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 ADAM22Q9P0K1 906 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 CYP26A1O43174 497 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 CAND2O75155 1236 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 CCDC14Q49A88 953 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 WDR59Q6PJI9 974 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 MCF2L2Q86YR7 1114 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 GSDMBQ8TAX9 411 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 NOD2Q9HC29 1040 aa17.52■□□□□ 0.39
SFXN1-201ENST00000321442 USP15Q9Y4E8 981 aaPredicted RBP17.52■□□□□ 0.39
SFXN1-201ENST00000321442 TMEM120BA0PK00 339 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 GOLGA8RI6L899 631 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 PRLRP16471 622 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 HHIPL2Q6UWX4 724 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 RFX6Q8HWS3 928 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 RNF169Q8NCN4 708 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 FBXO25Q8TCJ0 367 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 JMJD4Q9H9V9 463 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 FAM237AA0A1B0GTK4 181 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 DHX34Q14147 1143 aaKnown RBP17.51■□□□□ 0.39
SFXN1-201ENST00000321442 KCTD2Q14681 263 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 NXNQ6DKJ4 435 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 DPP9Q86TI2 863 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 LDHDQ86WU2 507 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 SYT2Q8N9I0 419 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-201ENST00000321442 KIAA0895Q8NCT3 520 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.51■□□□□ 0.39
SFXN1-201ENST00000321442 PPARGC1AQ9UBK2 798 aaKnown RBP17.51■□□□□ 0.39
SFXN1-201ENST00000321442 NXF1Q9UBU9 619 aaKnown RBP17.51■□□□□ 0.39
SFXN1-201ENST00000321442 SLC16A4O15374 487 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 AARSP49588 968 aaKnown RBP eCLIP17.51■□□□□ 0.39
SFXN1-201ENST00000321442 ARMC2Q8NEN0 867 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 DTX3LQ8TDB6 740 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 PPP4R1Q8TF05 950 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 AGBL1Q96MI9 1066 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 MRPL47Q9HD33 250 aaKnown RBP17.51■□□□□ 0.39
SFXN1-201ENST00000321442 MYOZ2Q9NPC6 264 aa17.51■□□□□ 0.39
SFXN1-201ENST00000321442 PDXKO00764 312 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 HSPA9P38646 679 aaKnown RBP17.5■□□□□ 0.39
SFXN1-201ENST00000321442 PDE1BQ01064 536 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 DNAJC24Q6P3W2 148 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 PDIK1LQ8N165 341 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 AENQ8WTP8 325 aaKnown RBP17.5■□□□□ 0.39
SFXN1-201ENST00000321442 RNF146Q9NTX7 359 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 ZFP69BQ9UJL9 534 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 DCTN3O75935 186 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 AGTP01019 485 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 VAMP7P51809 220 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 POLGP54098 1239 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-201ENST00000321442 FIGNQ5HY92 759 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 PADI6Q6TGC4 694 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 CENPUQ71F23 418 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 SH3RF1Q7Z6J0 888 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 LONP2Q86WA8 852 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 EIF2AK1Q9BQI3 630 aaKnown RBP17.5■□□□□ 0.39
SFXN1-201ENST00000321442 HSD3B7Q9H2F3 369 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 OSGEPQ9NPF4 335 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 MAD2L2Q9UI95 211 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 PRR12Q9ULL5 1215 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 SKAP2O75563 359 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-201ENST00000321442 SCTRP47872 440 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 PPP4CP60510 307 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 AGBL2Q5U5Z8 902 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 C4orf33Q8N1A6 199 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 SMC1BQ8NDV3 1235 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 TPCN2Q8NHX9 752 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 TTC1Q99614 292 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 AGPAT1Q99943 283 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 ARL2BPQ9Y2Y0 163 aa17.5■□□□□ 0.39
SFXN1-201ENST00000321442 IGF2BP3O00425 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms