RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 UTYO14607 1347 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 MST1RQ04912 1400 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 CTSWP56202 376 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 RASGRF1Q13972 1273 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 NLRP7Q8WX94 980 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 ZNF184Q99676 751 aaPredicted RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 C7orf25Q9BPX7 421 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 KIAA1683Q9H0B3 1180 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 ARHGEF10LQ9HCE6 1279 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 CHMP2AO43633 222 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 PCYT1AP49585 367 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 LBRQ14739 615 aaKnown RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 CYTH1Q15438 398 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 SNF8Q96H20 258 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 CDC42EP4Q9H3Q1 356 aaKnown RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 HEY2Q9UBP5 337 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 CA8P35219 290 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 YWHAGP61981 247 aaKnown RBP eCLIP17.7■□□□□ 0.42
PACS1-201ENST00000320580 TMPRSS15P98073 1019 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 L3MBTL3Q96JM7 780 aaPredicted RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 NEUROG2Q9H2A3 272 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 SEMA6BQ9H3T3 888 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 SLC12A4Q9UP95 1085 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 KCNQ4P56696 695 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 SFSWAPQ12872 951 aaKnown RBP17.69■□□□□ 0.42
PACS1-201ENST00000320580 BNIP1Q12981 228 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 LIN9Q5TKA1 542 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 CCNJLQ8IV13 435 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.69■□□□□ 0.42
PACS1-201ENST00000320580 CXorf38Q8TB03 319 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 DDX25Q9UHL0 483 aaKnown RBP17.69■□□□□ 0.42
PACS1-201ENST00000320580 MYMKA6NI61 221 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 MMP13P45452 471 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 PPP2R5CQ13362 524 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 ANO7Q6IWH7 933 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 PIDD1Q9HB75 910 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 CLIC5Q9NZA1 410 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 TXNDC16Q9P2K2 825 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 SALL4Q9UJQ4 1053 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 CTDP1Q9Y5B0 961 aaPredicted RBP17.69■□□□□ 0.42
PACS1-201ENST00000320580 MROH5Q6ZUA9 1318 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 KRT36O76013 467 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 MYL7Q01449 175 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 BFSP1Q12934 665 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 C11orf91Q3C1V1 193 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 FITM2Q8N6M3 262 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 FAM13CQ8NE31 585 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 LZICQ8WZA0 190 aa17.69■□□□□ 0.42
PACS1-201ENST00000320580 SYN2Q92777 582 aaPredicted RBP17.69■□□□□ 0.42
PACS1-201ENST00000320580 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.69■□□□□ 0.42
PACS1-201ENST00000320580 F8W031 263 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 LDHCP07864 332 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 PIK3CAP42336 1068 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 DRAP1Q14919 205 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 IL1RAPL1Q9NZN1 696 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 BTBD7Q9P203 1132 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 WDR35Q9P2L0 1181 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 RIPK2O43353 540 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 CYP4A11Q02928 519 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 CPVLQ9H3G5 476 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 AIPL1Q9NZN9 384 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 ZC3H4Q9UPT8 1303 aaKnown RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 FTLP02792 175 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 TRPC3Q13507 836 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 ZSCAN29Q8IWY8 852 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 PPP4R1Q8TF05 950 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 UBE2TQ9NPD8 197 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 NDUFA13Q9P0J0 144 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 TPD52P55327 224 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 BBS9Q3SYG4 887 aa17.68■□□□□ 0.42
PACS1-201ENST00000320580 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 PURBQ96QR8 312 aaKnown RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 EPB41L4AQ9HCS5 686 aaPredicted RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 DNAAF2Q9NVR5 837 aaKnown RBP17.68■□□□□ 0.42
PACS1-201ENST00000320580 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
PACS1-201ENST00000320580 HIC1Q14526 733 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 IZUMO3Q5VZ72 239 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 LVRNQ6Q4G3 990 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 ISLR2Q6UXK2 745 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 PYROXD1Q8WU10 500 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 UCMAQ8WVF2 138 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.67■□□□□ 0.42
PACS1-201ENST00000320580 SMG5Q9UPR3 1016 aaKnown RBP17.67■□□□□ 0.42
PACS1-201ENST00000320580 SGK1O00141 431 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 PSMC2P35998 433 aaKnown RBP17.67■□□□□ 0.42
PACS1-201ENST00000320580 GYG1P46976 350 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 USP46P62068 366 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 CAV1Q03135 178 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 CNGA3Q16281 694 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 TMEM132AQ24JP5 1023 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 TSSK1BQ9BXA7 367 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 ALG6Q9Y672 507 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 GOLGA8SH3BPF8 625 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 GOLGA8MH3BSY2 632 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 NCF2P19878 526 aaPredicted RBP17.67■□□□□ 0.42
PACS1-201ENST00000320580 GPC5P78333 572 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 RAD54LQ92698 747 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms