RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 MMEL1Q495T6 779 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 GBP7Q8N8V2 638 aaPredicted RBP18.36■□□□□ 0.53
GABRB3-202ENST00000311550 USP38Q8NB14 1042 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 OR6B3Q8NGW1 331 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 EPN3Q9H201 632 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 SEMA6BQ9H3T3 888 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 LRRC4Q9HBW1 653 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 FIS1Q9Y3D6 152 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 MYO3BQ8WXR4 1341 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 CHUKO15111 745 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 CAV1Q03135 178 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 XPOTO43592 962 aaKnown RBP18.36■□□□□ 0.53
GABRB3-202ENST00000311550 SEC24CP53992 1094 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 PDIA2Q13087 525 aaKnown RBP18.36■□□□□ 0.53
GABRB3-202ENST00000311550 EXOC8Q8IYI6 725 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 LRRIQ3A6PVS8 624 aaPredicted RBP18.36■□□□□ 0.53
GABRB3-202ENST00000311550 PI4K2BG5E9Z4 385 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 GPC4O75487 556 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 IRAK1P51617 712 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 DALRD3Q5D0E6 543 aaKnown RBP18.36■□□□□ 0.53
GABRB3-202ENST00000311550 CPA5Q8WXQ8 436 aa18.36■□□□□ 0.53
GABRB3-202ENST00000311550 DDX23Q9BUQ8 820 aaKnown RBP18.36■□□□□ 0.53
GABRB3-202ENST00000311550 AGO2Q9UKV8 859 aaKnown RBP18.36■□□□□ 0.53
GABRB3-202ENST00000311550 ESYT2A0FGR8 921 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 PHF20L1A8MW92 1017 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 TBX3O15119 743 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 RPA1P27694 616 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 TRIM65Q6PJ69 517 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 PCDHA10Q9Y5I2 948 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 SH3BP5O60239 455 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 TMPRSS15P98073 1019 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 PRPSAP1Q14558 356 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 FBXW10Q5XX13 1052 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 F5H423 210 aaPredicted RBP18.35■□□□□ 0.53
GABRB3-202ENST00000311550 PRMT1Q99873 361 aaKnown RBP18.35■□□□□ 0.53
GABRB3-202ENST00000311550 COPEO14579 308 aa18.35■□□□□ 0.53
GABRB3-202ENST00000311550 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
GABRB3-202ENST00000311550 NCF2P19878 526 aaPredicted RBP18.35■□□□□ 0.53
GABRB3-202ENST00000311550 CALR3Q96L12 384 aaKnown RBP18.35■□□□□ 0.53
GABRB3-202ENST00000311550 SCAF8Q9UPN6 1271 aaKnown RBP18.35■□□□□ 0.53
GABRB3-202ENST00000311550 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 MEFVO15553 781 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 PPP4CP60510 307 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 RHPN2Q8IUC4 686 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 MORC4Q8TE76 937 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 FAM118BQ9BPY3 351 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 TRIM55Q9BYV6 548 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 RSPH10B2B2RC85 870 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 DCTN3O75935 186 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 RSPH10BP0C881 870 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 CYP11B2P19099 503 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 CCNA1P78396 465 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 DPY19L2Q6NUT2 758 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 DBR1Q9UK59 544 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 KRT37O76014 449 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 OSBPP22059 807 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 RXRBP28702 533 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 ACOT2P49753 483 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 SMAD1Q15797 465 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 RSRC2Q7L4I2 434 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 PACSIN1Q9BY11 444 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 TBXAS1P24557 533 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 LSP1P33241 339 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 SARSP49591 514 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 DBN1Q16643 649 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 LONRF1Q17RB8 773 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 PLA2G4FQ68DD2 849 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 SYT2Q8N9I0 419 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 GJD4Q96KN9 370 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 PPARGC1AQ9UBK2 798 aaKnown RBP18.34■□□□□ 0.53
GABRB3-202ENST00000311550 IP6K2Q9UHH9 426 aa18.34■□□□□ 0.53
GABRB3-202ENST00000311550 CHN1P15882 459 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 SIX6OS1Q8N1H7 587 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 SPC25Q9HBM1 224 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 L1RE1Q9UN81 338 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 H3BQF6 201 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 PHF2O75151 1096 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 GGPS1O95749 300 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 SMARCA1P28370 1054 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 GPC3P51654 580 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 KCNV2Q8TDN2 545 aa18.33■□□□□ 0.53
GABRB3-202ENST00000311550 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.53
GABRB3-202ENST00000311550 NOP53Q9NZM5 478 aaKnown RBP18.33■□□□□ 0.53
GABRB3-202ENST00000311550 KCNJ1P48048 391 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 STRIP1Q5VSL9 837 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 GSDMBQ8TAX9 411 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 KLC2Q9H0B6 622 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 M0QYV0 167 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 SMIM24O75264 130 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 MED24O75448 989 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 PSPC1Q8WXF1 523 aaKnown RBP18.33■□□□□ 0.52
GABRB3-202ENST00000311550 CYTH2Q99418 400 aa18.33■□□□□ 0.52
GABRB3-202ENST00000311550 ARSEP51690 589 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 BYSLQ13895 437 aaKnown RBP18.32■□□□□ 0.52
GABRB3-202ENST00000311550 SNRNP35Q16560 246 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms