RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PDCP20941 246 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 HSP90AB2PQ58FF8 381 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 NT5DC1Q5TFE4 455 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 BORAQ6PGQ7 559 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 LCNL1Q6ZST4 164 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 USP45Q70EL2 814 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 LGI4Q8N135 537 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 ZSCAN18Q8TBC5 510 aaPredicted RBP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 RABGGTAQ92696 567 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 GCDHQ92947 438 aaPredicted RBP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 HPS3Q969F9 1004 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 RUNDC1Q96C34 613 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 GPHA2Q96T91 129 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 BCO1Q9HAY6 547 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 ING3Q9NXR8 418 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 TRPS1Q9UHF7 1281 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 SAP30BPQ9UHR5 308 aaKnown RBP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 FAM184BQ9ULE4 1060 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 NOB1Q9ULX3 412 aaKnown RBP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 SIK3Q9Y2K2 1263 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 CCDC154A6NI56 674 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 ENDOD1O94919 500 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 GASTP01350 101 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 CRHR1P34998 444 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 FXR1P51114 621 aaKnown RBP eCLIP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 EPHB4P54760 987 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 ATP2C1P98194 919 aaPredicted RBP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 DUSP8Q13202 625 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 SAFB2Q14151 953 aaKnown RBP eCLIP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 UAP1L1Q3KQV9 507 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 C3orf36Q3SXR2 165 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 FAM180AQ6UWF9 173 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 PLEKHH3Q7Z736 793 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 CATIPQ7Z7H3 387 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 ADGRE4PQ86SQ3 457 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 C14orf80Q86SX3 495 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 SLC35G2Q8TBE7 412 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 ZNF480Q8WV37 535 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 TAAR9Q96RI9 348 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 SEC61A2Q9H9S3 476 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 NMRK2Q9NPI5 230 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 TLR9Q9NR96 1032 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 INTUQ9ULD6 942 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 DNM3Q9UQ16 869 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 NR2E1Q9Y466 385 aa5.82□□□□□ -1.48
CCDC54-201ENST00000261058 SLC26A4O43511 780 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 SGTAO43765 313 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 AKR1B10O60218 316 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 B4GALT4O60513 344 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 PRAMEF4O60810 478 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 ECHS1P30084 290 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 SREBF1P36956 1147 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 BPIFB4P59827 614 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 MINDY4Q4G0A6 757 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 ZDHHC14Q8IZN3 488 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 ANKRD53Q8N9V6 530 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 SYT8Q8NBV8 401 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 OR7D4Q8NG98 312 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 OR14K1Q8NGZ2 314 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 DPF2Q92785 391 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 HDAC10Q969S8 669 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 CLIP3Q96DZ5 547 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 MEGF9Q9H1U4 602 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 GPRC5DQ9NZD1 345 aa5.81□□□□□ -1.48
CCDC54-201ENST00000261058 GOLGA6CA6NDK9 693 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 GOLGA6BA6NDN3 693 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 NRP1O14786 923 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 KIF3BO15066 747 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 ERC2O15083 957 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 OFD1O75665 1012 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 GOLGA6DP0CG33 693 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
CCDC54-201ENST00000261058 GYPEP15421 78 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 HSPA6P17066 643 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 GUCY1A2P33402 732 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 PPP2CBP62714 309 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 PPP2CAP67775 309 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 DSC2Q02487 901 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 NOMO1Q15155 1222 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 SURF1Q15526 300 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 GFOD2Q3B7J2 385 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 ZNF568Q3ZCX4 644 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 IFIT1BQ5T764 474 aaKnown RBP5.8□□□□□ -1.48
CCDC54-201ENST00000261058 WDR75Q8IWA0 830 aaKnown RBP5.8□□□□□ -1.48
CCDC54-201ENST00000261058 NSUN6Q8TEA1 469 aaKnown RBP5.8□□□□□ -1.48
CCDC54-201ENST00000261058 DIS3LQ8TF46 1054 aaKnown RBP5.8□□□□□ -1.48
CCDC54-201ENST00000261058 MVB12AQ96EY5 273 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 NEIL1Q96FI4 390 aaPredicted RBP5.8□□□□□ -1.48
CCDC54-201ENST00000261058 XYLT2Q9H1B5 865 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 GOLGA6AQ9NYA3 693 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 CFAP20Q9Y6A4 193 aaKnown RBP5.8□□□□□ -1.48
CCDC54-201ENST00000261058 DUSP10Q9Y6W6 482 aa5.8□□□□□ -1.48
CCDC54-201ENST00000261058 DTNBO60941 627 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 ITGA10O75578 1167 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 RAC3P60763 192 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 GBX1Q14549 363 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 ZNF267Q14586 743 aaPredicted RBP5.79□□□□□ -1.48
CCDC54-201ENST00000261058 ACAP1Q15027 740 aa5.79□□□□□ -1.48
CCDC54-201ENST00000261058 CYB5RLQ6IPT4 315 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms