RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PMS2P54278 862 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 RNF187Q5TA31 235 aaPredicted RBP16.42■□□□□ 0.22
DDX56-201ENST00000258772 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
DDX56-201ENST00000258772 ZDHHC14Q8IZN3 488 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 CNPY4Q8N129 248 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 KAT5Q92993 513 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 AGBL1Q96MI9 1066 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 ZNF70Q9UC06 446 aaPredicted RBP16.42■□□□□ 0.22
DDX56-201ENST00000258772 PCYOX1Q9UHG3 505 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 DDX20Q9UHI6 824 aaKnown RBP16.42■□□□□ 0.22
DDX56-201ENST00000258772 MAPK13O15264 365 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 SHBGP04278 402 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 CTNNA2P26232 953 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 GTF2BQ00403 316 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 MESDQ14696 234 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 TNIP1Q15025 636 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 HAUS6Q7Z4H7 955 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
DDX56-201ENST00000258772 CNKSR1Q969H4 720 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 TMEM117Q9H0C3 514 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 COL20A1Q9P218 1284 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
DDX56-201ENST00000258772 USP20Q9Y2K6 914 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 PMM2O15305 246 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 MTA2O94776 668 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 HNRNPH1P31943 449 aaKnown RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 MXI1P50539 228 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 QPCTQ16769 361 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 NOP9Q86U38 636 aaKnown RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 HOOK3Q86VS8 718 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 FAM71AQ8IYT1 594 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 IL31RAQ8NI17 732 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 EPS8L1Q8TE68 723 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 GLIS2Q9BZE0 524 aaPredicted RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 WNT8AQ9H1J5 351 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 CNOT10Q9H9A5 744 aaKnown RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 GRHL1Q9NZI5 618 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 RPTORQ8N122 1335 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 PODXLO00592 558 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 GGPS1O95749 300 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 PTGER2P43116 358 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 QARSP47897 775 aaKnown RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 BYSLQ13895 437 aaKnown RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
DDX56-201ENST00000258772 SH2D3AQ9BRG2 576 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 ST6GALNAC4Q9H4F1 302 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 CCPG1Q9ULG6 757 aa16.41■□□□□ 0.22
DDX56-201ENST00000258772 CNTNAP1P78357 1384 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 C5orf60A6NFR6 353 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 H0YHG0 523 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 PLSCR1O15162 318 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 ICAM1P05362 532 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 CAP2P40123 477 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 RPL21P46778 160 aaKnown RBP16.4■□□□□ 0.22
DDX56-201ENST00000258772 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 SEL1L2Q5TEA6 688 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 TTC27Q6P3X3 843 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 MIGA2Q7L4E1 593 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 NIPA1Q7RTP0 329 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 CD101Q93033 1021 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 KREMEN1Q96MU8 473 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 AGO4Q9HCK5 861 aaKnown RBP16.4■□□□□ 0.22
DDX56-201ENST00000258772 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 TRPC6Q9Y210 931 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 PCDHA3Q9Y5H8 950 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 ZNF536O15090 1300 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 NFIBO00712 420 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 CYP26A1O43174 497 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 ATMINO43313 823 aaPredicted RBP16.4■□□□□ 0.22
DDX56-201ENST00000258772 LYPLA2O95372 231 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 PYGMP11217 842 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
DDX56-201ENST00000258772 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 DENND2CQ68D51 928 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 KCNV1Q6PIU1 500 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 CCDC137Q6PK04 289 aaKnown RBP16.4■□□□□ 0.22
DDX56-201ENST00000258772 SLC47A2Q86VL8 602 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 CDAN1Q8IWY9 1227 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 MDM1Q8TC05 714 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 PGM2Q96G03 612 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.222e-10■■■■■ 195.6
DDX56-201ENST00000258772 PNMA2Q9UL42 364 aa16.4■□□□□ 0.22
DDX56-201ENST00000258772 GOLGA8IPA6NC78 632 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 GOLGA8JA6NMD2 632 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 BACH1O14867 736 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 SLC16A4O15374 487 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 ADRB2P07550 413 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 YWHABP31946 246 aaKnown RBP16.39■□□□□ 0.21
DDX56-201ENST00000258772 GBP1P32455 592 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 PEX3P56589 373 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 MCCD1P59942 119 aaPredicted RBP16.39■□□□□ 0.21
DDX56-201ENST00000258772 ACTN3Q08043 901 aaPredicted RBP16.39■□□□□ 0.21
DDX56-201ENST00000258772 SPP2Q13103 211 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 SLC29A2Q14542 456 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 RASA3Q14644 834 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 ARMC9Q7Z3E5 817 aa16.39■□□□□ 0.21
DDX56-201ENST00000258772 PPM1KQ8N3J5 372 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms