RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PSMC4P43686 418 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 EFNA5P52803 228 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 LACTBP83111 547 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 KLHDC7AQ5VTJ3 777 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 TLK2Q86UE8 772 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 EPN1Q9Y6I3 576 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 COL1A2P08123 1366 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 NDUFA10O95299 355 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 SLU7O95391 586 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 KLRC1P26715 233 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 PPP3CAQ08209 521 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 GPD1LQ8N335 351 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 ACRBPQ8NEB7 543 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 ERO1AQ96HE7 468 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 CAPNS2Q96L46 248 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 TARS2Q9BW92 718 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 CCDC113Q9H0I3 377 aa21.41■■□□□ 1.02
TNFRSF1A-201ENST00000162749 MSCO60682 206 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 FCGRTP55899 365 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 MYL7Q01449 175 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 DEFB115Q30KQ5 88 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 HAPLN2Q9GZV7 340 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 NHEJ1Q9H9Q4 299 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 V9GYY5 206 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 PLEKP08567 350 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 LINC01465Q8N7H1 131 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 PARD3BQ8TEW8 1205 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 CCDC94Q9BW85 323 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 NUCKS1Q9H1E3 243 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 ARHGAP20Q9P2F6 1191 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 FBXL5Q9UKA1 691 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 FHOD1Q9Y613 1164 aa21.4■■□□□ 1.02
TNFRSF1A-201ENST00000162749 CEP350Q5VT06 3117 aa21.39■■□□□ 1.02
TNFRSF1A-201ENST00000162749 TTLL13PA6NNM8 815 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MAGEB2O15479 319 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 IRX5P78411 483 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ZBTB45Q96K62 511 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MFSD14AQ96MC6 490 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 NLRP4Q96MN2 994 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 GOLGA6L9A6NEM1 432 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 GCLMP48507 274 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 PPFIA1Q13136 1202 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 GPIHBP1Q8IV16 184 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ZBTB8OSQ8IWT0 167 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 LRRN4CLQ8ND94 238 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 SYN2Q92777 582 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ZNF668Q96K58 619 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 FAM213AQ9BRX8 229 aa21.39■■□□□ 1.01
TNFRSF1A-201ENST00000162749 A0A0U1RQJ8 604 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 F2P00734 622 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CYP24A1Q07973 514 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 SLFN12LQ6IEE8 588 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ZPBP2Q6X784 338 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CCDC170Q8IYT3 715 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ATRIPQ8WXE1 791 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CCDC127Q96BQ5 260 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CREBZFQ9NS37 354 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ANKFY1Q9P2R3 1169 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 AGO2Q9UKV8 859 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 GABRQQ9UN88 632 aa21.38■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ASAP2O43150 1006 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 EXTL3O43909 919 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TFDP1Q14186 410 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 GRIK4Q16099 956 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MAPK6Q16659 721 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MARCH8Q5T0T0 291 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 HGSNATQ68CP4 663 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MTHFD1LQ6UB35 978 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 LMO3Q8TAP4 145 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 C2orf40Q9H1Z8 148 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 AJAP1Q9UKB5 411 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 REXO2Q9Y3B8 237 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 LRRIQ3A6PVS8 624 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 KIAA0391O15091 583 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 P4HA2O15460 535 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 N4BP1O75113 896 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 FLT3LGP49771 235 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 NLRP11P59045 1033 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CAP1Q01518 475 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 RAPGEF1Q13905 1077 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 SFMBT2Q5VUG0 894 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 KAT2BQ92831 832 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TMEM117Q9H0C3 514 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 KIAA1586Q9HCI6 787 aa21.37■■□□□ 1.01
TNFRSF1A-201ENST00000162749 A0A0B4J269 797 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 PRKCBP05771 671 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CYLC1P35663 651 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MXI1P50539 228 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 PTENP60484 403 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 GJB7Q6PEY0 223 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TMC2Q8TDI7 906 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TRIB2Q92519 343 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CCDC42Q96M95 316 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 POP1Q99575 1024 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MRPL4Q9BYD3 311 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 INTS2Q9H0H0 1204 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 IFT122Q9HBG6 1241 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ZNF233A6NK53 670 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 PMM2O15305 246 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms