RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CES5AQ6NT32 575 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 TPH2Q8IWU9 490 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 C4orf19Q8IY42 314 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 URGCPQ8TCY9 931 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 MTRQ99707 1265 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 XPNPEP1Q9NQW7 623 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 PLXNA3P51805 1871 aa18.65■□□□□ 0.58
PHGDH-213ENST00000641272 TDRD15B5MCY1 1934 aaKnown RBP18.64■□□□□ 0.58
PHGDH-213ENST00000641272 TBX3O15119 743 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 JAK2O60674 1132 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 DDHD2O94830 711 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 POMCP01189 267 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 CTSAP10619 480 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 FDPSP14324 419 aaKnown RBP18.64■□□□□ 0.57
PHGDH-213ENST00000641272 VCPP55072 806 aaKnown RBP18.64■□□□□ 0.57
PHGDH-213ENST00000641272 ME3Q16798 604 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 SRGAP1Q7Z6B7 1085 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 FERMT3Q86UX7 667 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 TNFRSF25Q93038 417 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 PGBD4Q96DM1 585 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 CPB2Q96IY4 423 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 PHOX2BQ99453 314 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 NAP1L4Q99733 375 aaKnown RBP18.64■□□□□ 0.57
PHGDH-213ENST00000641272 SMOC2Q9H3U7 446 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 BRMS1Q9HCU9 246 aa18.64■□□□□ 0.57
PHGDH-213ENST00000641272 PRG3Q9Y2Y8 225 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-213ENST00000641272 ZDBF2Q9HCK1 2354 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 SPDYE4A6NLX3 237 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 ZNF623O75123 536 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 ERLIN2O94905 339 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 PDGFBP01127 241 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-213ENST00000641272 BMS1Q14692 1282 aaKnown RBP18.63■□□□□ 0.57
PHGDH-213ENST00000641272 PTPN14Q15678 1187 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 CALCRLQ16602 461 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 DDX53Q86TM3 631 aaKnown RBP18.63■□□□□ 0.57
PHGDH-213ENST00000641272 SLFN12Q8IYM2 578 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 FBXL6Q8N531 539 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 NSUN7Q8NE18 718 aaKnown RBP18.63■□□□□ 0.57
PHGDH-213ENST00000641272 ASAP3Q8TDY4 903 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 WASF1Q92558 559 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 ASIC4Q96FT7 647 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 CCDC43Q96MW1 224 aaKnown RBP18.63■□□□□ 0.57
PHGDH-213ENST00000641272 EIF2AK1Q9BQI3 630 aaKnown RBP18.63■□□□□ 0.57
PHGDH-213ENST00000641272 APOL6Q9BWW8 343 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 EIF2AQ9BY44 585 aaKnown RBP18.63■□□□□ 0.57
PHGDH-213ENST00000641272 ADAM7Q9H2U9 754 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 ZSWIM4Q9H7M6 989 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 NR2E1Q9Y466 385 aa18.63■□□□□ 0.57
PHGDH-213ENST00000641272 A0A087WWV3 80 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 TSPAN1O60635 241 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 BAG4O95429 457 aaKnown RBP18.62■□□□□ 0.57
PHGDH-213ENST00000641272 HOXA11P31270 313 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-213ENST00000641272 MLH1P40692 756 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 ITIH3Q06033 890 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 ANKRD1Q15327 319 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 TMC5Q6UXY8 1006 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 OTUD6AQ7L8S5 288 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 BMP8AQ7Z5Y6 402 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 TDRD5Q8NAT2 981 aaKnown RBP18.62■□□□□ 0.57
PHGDH-213ENST00000641272 KREMEN2Q8NCW0 462 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 TCP11Q8WWU5 503 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 FAM193BQ96PV7 902 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-213ENST00000641272 KCNH6Q9H252 994 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 DZANK1Q9NVP4 752 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 HES2Q9Y543 173 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 PPME1Q9Y570 386 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 PIEZO1Q92508 2521 aa18.62■□□□□ 0.57
PHGDH-213ENST00000641272 CNTNAP2Q9UHC6 1331 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 POTEMA6NI47 508 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 BTBD18B2RXH4 712 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 INO80B-WBP1J3KQ70 363 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 C2CD2LO14523 706 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 GAS2O43903 313 aaKnown RBP18.61■□□□□ 0.57
PHGDH-213ENST00000641272 ASGR2P07307 311 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 MTHFRP42898 656 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 ANAPC15P60006 121 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 CAPSQ13938 189 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 CABP7Q86V35 215 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 DIS3L2Q8IYB7 885 aaKnown RBP18.61■□□□□ 0.57
PHGDH-213ENST00000641272 SMG8Q8ND04 991 aaKnown RBP18.61■□□□□ 0.57
PHGDH-213ENST00000641272 SLC22A17Q8WUG5 538 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 RSPH1Q8WYR4 309 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 RIPOR3Q96MK2 946 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 NECTIN4Q96NY8 510 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 DBR1Q9UK59 544 aaKnown RBP18.61■□□□□ 0.57
PHGDH-213ENST00000641272 IPPQ9Y573 584 aa18.61■□□□□ 0.57
PHGDH-213ENST00000641272 F8W810 466 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 NRP1O14786 923 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 NEMFO60524 1076 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 USO1O60763 962 aaKnown RBP18.6■□□□□ 0.57
PHGDH-213ENST00000641272 BRD1O95696 1058 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 MYBP10242 640 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 ITGA4P13612 1032 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 NCLP19338 710 aaKnown RBP18.6■□□□□ 0.57
PHGDH-213ENST00000641272 ATP2B1P20020 1258 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 OR1G1P47890 313 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 SCNN1GP51170 649 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 GUCY1B3Q02153 619 aa18.6■□□□□ 0.57
PHGDH-213ENST00000641272 ST3GAL1Q11201 340 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 429.8 ms