RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 CCNL1Q9UK58 526 aaPredicted RBP11.56□□□□□ -0.56
KCNMA1-259ENST00000639406 TRIM24O15164 1050 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 ZSCAN9O15535 394 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 EFCAB14O75071 495 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 FMNL1O95466 1100 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 OATP04181 439 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 SMARCA1P28370 1054 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 PUM3Q15397 648 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 GALNT17Q6IS24 598 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 MAP4K1Q92918 833 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 MED10Q9BTT4 135 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 HEMGNQ9BXL5 484 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 OSBPL8Q9BZF1 889 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 C20orf96Q9NUD7 363 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 INSRP06213 1382 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 FAM47DPA6NHR8 397 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 GHRP10912 638 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 TRAPPC10P48553 1259 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 SLC39A6Q13433 755 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 TAS2R42Q7RTR8 314 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 FANCEQ9HB96 536 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 ATP8A2Q9NTI2 1148 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 KCNG1Q9UIX4 513 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 SRPRBQ9Y5M8 271 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 C1orf232A0A0U1RR37 186 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 HNRNPRO43390 633 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 CDH2P19022 906 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 SOX6P35712 828 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 CPA2P48052 419 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 PPARAQ07869 468 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 THEMIS2Q5TEJ8 643 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 C4orf50Q6ZRC1 276 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 DHX38Q92620 1227 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 MRPL1Q9BYD6 325 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 TTC7AQ9ULT0 858 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 TMEM120BA0PK00 339 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 H3BQF6 201 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 MYCLP12524 364 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 FAM196AQ6ZSG2 479 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 OR8H2Q8N162 312 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 AGBL1Q96MI9 1066 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 DEPDC7Q96QD5 511 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 CYLDQ9NQC7 956 aa11.55□□□□□ -0.56
KCNMA1-259ENST00000639406 FOSL2P15408 326 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 NLRP11P59045 1033 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 MECOMQ03112 1051 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 ATP11CQ8NB49 1132 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 MDM1Q8TC05 714 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 AGR3Q8TD06 166 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 SLC5A4Q9NY91 659 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 HESX1Q9UBX0 185 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 ADGRA3Q8IWK6 1321 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 GAS7O60861 476 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 USH1GQ495M9 461 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 FAM47AQ5JRC9 791 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 IYDQ6PHW0 289 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 SEPT1Q8WYJ6 367 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 GPKOWQ92917 476 aaPredicted RBP eCLIP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 EDC3Q96F86 508 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 AK8Q96MA6 479 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 YEATS2Q9ULM3 1422 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 PIK3R2O00459 728 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 AIM2O14862 343 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 GRIN3BO60391 1043 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 SRP72O76094 671 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 VIL1P09327 827 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 PYGMP11217 842 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 TCN1P20061 433 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 CCT3P49368 545 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 AKAP4Q5JQC9 854 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 IRGCQ6NXR0 463 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 NYAP1Q6ZVC0 841 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 TRIM74Q86UV6 250 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 TRIM73Q86UV7 250 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 FHDC1Q9C0D6 1143 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 CLEC4MQ9H2X3 399 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 RIMS2Q9UQ26 1411 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 ABCC4O15439 1325 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 USP1O94782 785 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 CDC25CP30307 473 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 IFNA8P32881 189 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 PPP1R36Q96LQ0 422 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 NACA2Q9H009 215 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 CLIC2O15247 247 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 TEX33O43247 280 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 FRA10AC1Q70Z53 315 aa11.54□□□□□ -0.56
KCNMA1-259ENST00000639406 KRT73Q86Y46 540 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms