RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 NBPF3Q9H094 633 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 TUFT1Q9NNX1 390 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 SMIM22K7EJ46 135 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 PPP4CP60510 307 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 MAP3K21Q5TCX8 1036 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 TRIM42Q8IWZ5 723 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 C7orf31Q8N865 590 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 CCT6BQ92526 530 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 PITPNM2Q9BZ72 1349 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 C21orf2O43822 256 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 NOL3O60936 208 aaKnown RBP17.78■□□□□ 0.44
SCARB2-210ENST00000638567 CATSPER3Q86XQ3 398 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 JAMLQ86YT9 394 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 GABPB2Q8TAK5 448 aaPredicted RBP17.78■□□□□ 0.44
SCARB2-210ENST00000638567 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 NGRNQ9NPE2 291 aaKnown RBP17.78■□□□□ 0.44
SCARB2-210ENST00000638567 CHORDC1Q9UHD1 332 aaPredicted RBP17.78■□□□□ 0.44
SCARB2-210ENST00000638567 TBX3O15119 743 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 RTN2O75298 545 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 DCTN3O75935 186 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 SCP2P22307 547 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 KRT76Q01546 638 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 LMBRD2Q68DH5 695 aaPredicted RBP17.78■□□□□ 0.44
SCARB2-210ENST00000638567 CFAP36Q96G28 342 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 DCTN4Q9UJW0 460 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 ALG6Q9Y672 507 aa17.78■□□□□ 0.44
SCARB2-210ENST00000638567 PRPSAP2O60256 369 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 SMIM24O75264 130 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 PRLRP16471 622 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 ABCD1P33897 745 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 KCNJ1P48048 391 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 GPS1Q13098 491 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 CDO1Q16878 200 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 IZUMO3Q5VZ72 239 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 LDHDQ86WU2 507 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 SP8Q8IXZ3 490 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 CYFIP2Q96F07 1278 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 SNF8Q96H20 258 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 SCYL1Q96KG9 808 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 PRMT1Q99873 361 aaKnown RBP17.77■□□□□ 0.44
SCARB2-210ENST00000638567 HAUS2Q9NVX0 235 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 TPX2Q9ULW0 747 aaKnown RBP17.77■□□□□ 0.44
SCARB2-210ENST00000638567 TCP11X1B4DZS4 312 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 CLDN3O15551 220 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 MED7O43513 233 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 SSTR3P32745 418 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-210ENST00000638567 HSD17B3P37058 310 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 ARL4CP56559 192 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 CDK17Q00537 523 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 CCNYQ8ND76 341 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 HSPH1Q92598 858 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 LRRC37BQ96QE4 947 aa17.77■□□□□ 0.44
SCARB2-210ENST00000638567 XPO6Q96QU8 1125 aaKnown RBP17.77■□□□□ 0.44
SCARB2-210ENST00000638567 DBR1Q9UK59 544 aaKnown RBP17.77■□□□□ 0.44
SCARB2-210ENST00000638567 TOM1L1O75674 476 aa17.77■□□□□ 0.43
SCARB2-210ENST00000638567 GGPS1O95749 300 aa17.77■□□□□ 0.43
SCARB2-210ENST00000638567 PTGISQ16647 500 aa17.77■□□□□ 0.43
SCARB2-210ENST00000638567 RHOT1Q8IXI2 618 aa17.77■□□□□ 0.43
SCARB2-210ENST00000638567 NLRP4Q96MN2 994 aa17.77■□□□□ 0.43
SCARB2-210ENST00000638567 APOL6Q9BWW8 343 aa17.77■□□□□ 0.43
SCARB2-210ENST00000638567 BCAP29Q9UHQ4 241 aa17.77■□□□□ 0.43
SCARB2-210ENST00000638567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.77■□□□□ 0.43
SCARB2-210ENST00000638567 FAM107AO95990 144 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 ZBED1O96006 694 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 MARK3P27448 753 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 CDC42EP5Q6NZY7 148 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.76■□□□□ 0.43
SCARB2-210ENST00000638567 ATP6V0A4Q9HBG4 840 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 SUGT1Q9Y2Z0 365 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 AGTP01019 485 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 MIPOL1Q8TD10 442 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 MTMR8Q96EF0 704 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 SEC16BQ96JE7 1060 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 ERP44Q9BS26 406 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 MED10Q9BTT4 135 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 TRIM55Q9BYV6 548 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 ADAM33Q9BZ11 813 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 KIAA1586Q9HCI6 787 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 FEM1BQ9UK73 627 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 IQANK1A0A1B0GTG1 560 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 GIPC1O14908 333 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 PHF2O75151 1096 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 SPAG7O75391 227 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 GMNNO75496 209 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 LDHAP00338 332 aaKnown RBP17.76■□□□□ 0.43
SCARB2-210ENST00000638567 TMEM253P0C7T8 217 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 PSMC5P62195 406 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 KRT27Q7Z3Y8 459 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 SH3RF1Q7Z6J0 888 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 KIAA0895Q8NCT3 520 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 KCNV2Q8TDN2 545 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 PPP1R16BQ96T49 567 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 NUF2Q9BZD4 464 aa17.76■□□□□ 0.43
SCARB2-210ENST00000638567 GNA15P30679 374 aa17.75■□□□□ 0.43
SCARB2-210ENST00000638567 LONRF1Q17RB8 773 aa17.75■□□□□ 0.43
SCARB2-210ENST00000638567 TPCN2Q8NHX9 752 aa17.75■□□□□ 0.43
SCARB2-210ENST00000638567 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
SCARB2-210ENST00000638567 HDAC7Q8WUI4 952 aa17.75■□□□□ 0.43
SCARB2-210ENST00000638567 C9orf72Q96LT7 481 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms