RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 LIMD1Q9UGP4 676 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 VAV3Q9UKW4 847 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 PPME1Q9Y570 386 aa19.96■□□□□ 0.79
SMN2-213ENST00000614240 BRD1O95696 1058 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 ALDH2P05091 517 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 LAMTOR4Q0VGL1 99 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 NCAPH2Q6IBW4 605 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 PPP4R3AQ6IN85 833 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 TMC5Q6UXY8 1006 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 AGMOQ6ZNB7 445 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 PIK3AP1Q6ZUJ8 805 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 TCP11Q8WWU5 503 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 KCNMB3Q9NPA1 279 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 FAM86C1Q9NVL1 165 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 FAN1Q9Y2M0 1017 aa19.95■□□□□ 0.78
SMN2-213ENST00000614240 ZDBF2Q9HCK1 2354 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 ERLIN2O94905 339 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 BAG4O95429 457 aaKnown RBP19.94■□□□□ 0.78
SMN2-213ENST00000614240 ASGR2P07307 311 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 YWHABP31946 246 aaKnown RBP19.94■□□□□ 0.78
SMN2-213ENST00000614240 EPHA7Q15375 998 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 PTPN14Q15678 1187 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 XKR9Q5GH70 373 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 MRPL10Q7Z7H8 261 aaKnown RBP19.94■□□□□ 0.78
SMN2-213ENST00000614240 ZDHHC14Q8IZN3 488 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 RNF149Q8NC42 400 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 LXNQ9BS40 222 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 DHX33Q9H6R0 707 aaKnown RBP19.94■□□□□ 0.78
SMN2-213ENST00000614240 WRAP73Q9P2S5 460 aaPredicted RBP19.94■□□□□ 0.78
SMN2-213ENST00000614240 CNTNAP2Q9UHC6 1331 aa19.94■□□□□ 0.78
SMN2-213ENST00000614240 TBX3O15119 743 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 ASAP2O43150 1006 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 GAS2O43903 313 aaKnown RBP19.93■□□□□ 0.78
SMN2-213ENST00000614240 DDHD2O94830 711 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 POMCP01189 267 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 NCBP1Q09161 790 aaKnown RBP19.93■□□□□ 0.78
SMN2-213ENST00000614240 SCRN1Q12765 414 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 CTTNQ14247 550 aaKnown RBP19.93■□□□□ 0.78
SMN2-213ENST00000614240 EMC2Q15006 297 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 C4orf19Q8IY42 314 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 ACSF2Q96CM8 615 aaPredicted RBP19.93■□□□□ 0.78
SMN2-213ENST00000614240 KLHL5Q96PQ7 755 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 TMEM175Q9BSA9 504 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 VN1R3Q9BXE9 311 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 MFSD1Q9H3U5 465 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 ZSWIM4Q9H7M6 989 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 MINDY3Q9H8M7 445 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 SFXN1Q9H9B4 322 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 MRPL17Q9NRX2 175 aaKnown RBP19.93■□□□□ 0.78
SMN2-213ENST00000614240 RGL1Q9NZL6 768 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 USTQ9Y2C2 406 aa19.93■□□□□ 0.78
SMN2-213ENST00000614240 H0Y858 1186 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 B4GALT3O60512 393 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 ITGA4P13612 1032 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 NUBP1P53384 320 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 CYP4A11Q02928 519 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 FERMT3Q86UX7 667 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 TPH2Q8IWU9 490 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 SLFN12Q8IYM2 578 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 CNNM3Q8NE01 707 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 OXER1Q8TDS5 423 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 HAS1Q92839 578 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 DYDC2Q96IM9 177 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 MTRQ99707 1265 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 SMOC2Q9H3U7 446 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 UBN1Q9NPG3 1134 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 GJB4Q9NTQ9 266 aa19.92■□□□□ 0.78
SMN2-213ENST00000614240 C2CD2LO14523 706 aa19.91■□□□□ 0.78
SMN2-213ENST00000614240 CNPP09543 421 aaKnown RBP19.91■□□□□ 0.78
SMN2-213ENST00000614240 HOXA11P31270 313 aaPredicted RBP19.91■□□□□ 0.78
SMN2-213ENST00000614240 AFF1P51825 1210 aaKnown RBP19.91■□□□□ 0.78
SMN2-213ENST00000614240 UBXN11Q5T124 520 aa19.91■□□□□ 0.78
SMN2-213ENST00000614240 CCDC149Q6ZUS6 474 aa19.91■□□□□ 0.78
SMN2-213ENST00000614240 OTOP3Q7RTS5 596 aa19.91■□□□□ 0.78
SMN2-213ENST00000614240 GPR149Q86SP6 731 aa19.91■□□□□ 0.78
SMN2-213ENST00000614240 POTEDQ86YR6 584 aa19.91■□□□□ 0.78
SMN2-213ENST00000614240 WASF1Q92558 559 aa19.91■□□□□ 0.78
SMN2-213ENST00000614240 PRG3Q9Y2Y8 225 aaPredicted RBP19.91■□□□□ 0.78
SMN2-213ENST00000614240 NRP1O14786 923 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 GALR2O43603 387 aaPredicted RBP19.9■□□□□ 0.78
SMN2-213ENST00000614240 ST18O60284 1047 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 DTNBO60941 627 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 URODP06132 367 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 NCLP19338 710 aaKnown RBP19.9■□□□□ 0.78
SMN2-213ENST00000614240 OR1G1P47890 313 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 CLCN4P51793 760 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 AK2P54819 239 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 TFDP1Q14186 410 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 MXD4Q14582 209 aaPredicted RBP19.9■□□□□ 0.78
SMN2-213ENST00000614240 CCDC43Q96MW1 224 aaKnown RBP19.9■□□□□ 0.78
SMN2-213ENST00000614240 BRMS1Q9HCU9 246 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 ORC3Q9UBD5 711 aaPredicted RBP19.9■□□□□ 0.78
SMN2-213ENST00000614240 SSX2IPQ9Y2D8 614 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 STK36Q9NRP7 1315 aa19.9■□□□□ 0.78
SMN2-213ENST00000614240 INO80B-WBP1J3KQ70 363 aa19.89■□□□□ 0.77
SMN2-213ENST00000614240 ZBTB39O15060 712 aa19.89■□□□□ 0.77
SMN2-213ENST00000614240 GFRA3O60609 400 aa19.89■□□□□ 0.77
SMN2-213ENST00000614240 PFKFB2O60825 505 aa19.89■□□□□ 0.77
SMN2-213ENST00000614240 NR1I2O75469 434 aa19.89■□□□□ 0.77
SMN2-213ENST00000614240 TRIOO75962 3097 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms