RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ZNF568Q3ZCX4 644 aa18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 MRPL4Q9BYD3 311 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-206ENST00000613459 USP17L5A8MUK1 530 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 FLOT2Q14254 428 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 TRADDQ15628 312 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 TMEM270Q6UE05 265 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 FAM47EQ6ZV65 393 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 STAMBPL1Q96FJ0 436 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 SMYD3Q9H7B4 428 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 STAT3P40763 770 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 CRKP46108 304 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 VIPAS39Q9H9C1 493 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 OLA1Q9NTK5 396 aaKnown RBP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 ARHGAP26Q9UNA1 814 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 MROH7-TTC4A0A0A0MT08 1334 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 AARSP49588 968 aaKnown RBP eCLIP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 NOP14P78316 857 aaKnown RBP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 GFPT1Q06210 699 aaPredicted RBP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 TBCCQ15814 346 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 EFHC2Q5JST6 749 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 THNSL1Q8IYQ7 743 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 SH3TC2Q8TF17 1288 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 SEPT8Q92599 483 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 OSBPL1AQ9BXW6 950 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 ZNF302Q9NR11 478 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 KLC4Q9NSK0 619 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 LAMC1P11047 1609 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 PNPLA7Q6ZV29 1317 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 GH2P01242 217 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 BRAFP15056 766 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 GCLMP48507 274 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 RNF219Q5W0B1 726 aaPredicted RBP18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 SH3GL3Q99963 347 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 SUGT1Q9Y2Z0 365 aa18.48■□□□□ 0.55
HMGXB3-206ENST00000613459 E9PMD0 336 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 PSMD3O43242 534 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 KRT14P02533 472 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 ARPP19P56211 112 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 ATP2C1P98194 919 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 DRAP1Q14919 205 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 DALRD3Q5D0E6 543 aaKnown RBP18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 SLC24A3Q9HC58 644 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 TUFT1Q9NNX1 390 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 KRT4P19013 534 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 GNA15P30679 374 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 LRIG3Q6UXM1 1119 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 PIGBQ92521 554 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 GOLPH3LQ9H4A5 285 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 PARVAQ9NVD7 372 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 GTSE1Q9NYZ3 720 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 KRT33BQ14525 404 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 SLC10A5Q5PT55 438 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 CAPRIN2Q6IMN6 1127 aaKnown RBP18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 EFHBQ8N7U6 833 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 FOXP3Q9BZS1 431 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 USP27XA6NNY8 438 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 PDIA5Q14554 519 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 STILQ15468 1287 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 IMPG1Q17R60 797 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 ENAHQ8N8S7 591 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 C11orf70Q9BRQ4 267 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 WWP1Q9H0M0 922 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 VPS11Q9H270 941 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 EML4Q9HC35 981 aaKnown RBP18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 REREQ9P2R6 1566 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 POTEMA6NI47 508 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 PDXKO00764 312 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 TRIM66O15016 1216 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 RAD23BP54727 409 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 GPD1LQ8N335 351 aa18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 CHCHD3Q9NX63 227 aaKnown RBP18.47■□□□□ 0.55
HMGXB3-206ENST00000613459 LLGL1Q15334 1064 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 TMEM259Q4ZIN3 620 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 RARS2Q5T160 578 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 TTLL6Q8N841 843 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 KCNV2Q8TDN2 545 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 PIGOQ8TEQ8 1089 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 QTRT2Q9H974 415 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 SMG5Q9UPR3 1016 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 ZHX2Q9Y6X8 837 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 DENND3A2RUS2 1198 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 TRIM49BA6NDI0 452 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 KCNV1Q6PIU1 500 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 CYB5R4Q7L1T6 521 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 KCTD17Q8N5Z5 321 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 ULK4Q96C45 1275 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 THOC1Q96FV9 657 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 FAM161BQ96MY7 647 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 KCNF1Q9H3M0 494 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 ITIH6Q6UXX5 1313 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 PIK3R2O00459 728 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 MYO1DO94832 1006 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 ANP32DO95626 131 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 ZNF560Q96MR9 790 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 EFNA5P52803 228 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 PSMC1P62191 440 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms