RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ATL2Q8NHH9 583 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 FBXO25Q8TCJ0 367 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 TRABDQ9H4I3 376 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 IFT122Q9HBG6 1241 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 FMO5P49326 533 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 VAMP7P51809 220 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 ARL4CP56559 192 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 RFX6Q8HWS3 928 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 ADGRF4Q8IZF3 695 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 MREGQ8N565 214 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 KIAA0895Q8NCT3 520 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 KRT19P08727 400 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 BMP3P12645 472 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 KCNJ1P48048 391 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 HSPA2P54652 639 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 TPD52P55327 224 aaPredicted RBP15.63■□□□□ 0.09
VPS36-207ENST00000611132 SYDE1Q6ZW31 735 aaPredicted RBP15.63■□□□□ 0.09
VPS36-207ENST00000611132 STAMBPL1Q96FJ0 436 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 RBM41Q96IZ5 413 aaKnown RBP15.63■□□□□ 0.09
VPS36-207ENST00000611132 SMG5Q9UPR3 1016 aaKnown RBP15.63■□□□□ 0.09
VPS36-207ENST00000611132 SCINQ9Y6U3 715 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 ASAP2O43150 1006 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 SHOX2O60902 331 aaPredicted RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 SYDE2Q5VT97 1194 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 NAIF1Q69YI7 327 aaPredicted RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 TMEM154Q6P9G4 183 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 EPS8L3Q8TE67 593 aaKnown RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 HAUS1Q96CS2 278 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 C9orf72Q96LT7 481 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 ADAM22Q9P0K1 906 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 MCF2LO15068 1137 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 NVLO15381 856 aaKnown RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 GRAMD1BQ3KR37 738 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 HP1BP3Q5SSJ5 553 aaPredicted RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 BTNL9Q6UXG8 535 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 NME8Q8N427 588 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 EIF1ADQ8N9N8 165 aaKnown RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 EMSYQ7Z589 1322 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 TMPRSS15P98073 1019 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 ITGB3BPQ13352 177 aaPredicted RBP15.62■□□□□ 0.09
VPS36-207ENST00000611132 TMC3Q7Z5M5 1100 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 SERPINB12Q96P63 405 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 KMT5AQ9NQR1 393 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 IFT172Q9UG01 1749 aa15.62■□□□□ 0.09
VPS36-207ENST00000611132 CLDN3O15551 220 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 RCSD1Q6JBY9 416 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 MARCH10Q8NA82 808 aaPredicted RBP15.61■□□□□ 0.09
VPS36-207ENST00000611132 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
VPS36-207ENST00000611132 TTC1Q99614 292 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 REEP2Q9BRK0 252 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 PAX7P23759 505 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 KLHL38Q2WGJ6 581 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 C1orf146Q5VVC0 180 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 SCYL2Q6P3W7 929 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 CRLF3Q8IUI8 442 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 SH3GL2Q99962 352 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 NDE1Q9NXR1 346 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 CES2O00748 559 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 COPEO14579 308 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 ITGA4P13612 1032 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 COMTP21964 271 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 NMT1P30419 496 aaKnown RBP15.61■□□□□ 0.09
VPS36-207ENST00000611132 CDKL2Q92772 493 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 COMMD10Q9Y6G5 202 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 ESYT2A0FGR8 921 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 DNAJC8O75937 253 aaPredicted RBP15.61■□□□□ 0.09
VPS36-207ENST00000611132 EYA4O95677 639 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 FGFR2P21802 821 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 PDE1BQ01064 536 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 QRICH1Q2TAL8 776 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 CYFIP1Q7L576 1253 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 ZNF571Q7Z3V5 609 aaPredicted RBP15.61■□□□□ 0.09
VPS36-207ENST00000611132 KIAA0825Q8IV33 1275 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 AFAP1L2Q8N4X5 818 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 KIF9Q9HAQ2 790 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 MAD2L2Q9UI95 211 aa15.61■□□□□ 0.09
VPS36-207ENST00000611132 DLG5Q8TDM6 1919 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 KRT37O76014 449 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 RARGP13631 454 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 NPEPPSP55786 919 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 SNX16P57768 344 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 AP2B1P63010 937 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 GPS1Q13098 491 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 CDAN1Q8IWY9 1227 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 ZBED8Q8IZ13 594 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 MIEF2Q96C03 454 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 RIOK1Q9BRS2 568 aaKnown RBP15.6■□□□□ 0.09
VPS36-207ENST00000611132 GOLGA8SH3BPF8 625 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 CCDC22O60826 627 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 TOM1L1O75674 476 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 MARK3P27448 753 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 RBM15Q96T37 977 aaKnown RBP eCLIP15.6■□□□□ 0.09
VPS36-207ENST00000611132 MPHOSPH6Q99547 160 aaKnown RBP15.6■□□□□ 0.09
VPS36-207ENST00000611132 UVRAGQ9P2Y5 699 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 C15orf41Q9Y2V0 281 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 MYBP10242 640 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 ALAS1P13196 640 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 280.7 ms