RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 DAAM1Q9Y4D1 1078 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 ZHX2Q9Y6X8 837 aa21.85■■□□□ 1.09
SHKBP1-225ENST00000600733 TMEM150BA6NC51 233 aa21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 KIAA0754O94854 1291 aa21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 MAGOHP61326 146 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 C7orf43Q8WVR3 580 aa21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 MAGOHBQ96A72 148 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 C18orf8Q96DM3 657 aa21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 ACP6Q9NPH0 428 aa21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 ZDHHC18Q9NUE0 388 aa21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 ZNF70Q9UC06 446 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-225ENST00000600733 PPFIA2O75334 1257 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 PPP2R2AP63151 447 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 MYBPC2Q14324 1141 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 EPC2Q52LR7 807 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 AGBL2Q5U5Z8 902 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 OTUD6BQ8N6M0 293 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 FAM151AQ8WW52 585 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 TXLNGYQ9BZA5 131 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 CNTNAP1P78357 1384 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 ATXN2Q99700 1313 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 NFIBO00712 420 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 DHX15O43143 795 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 ATMINO43313 823 aaPredicted RBP21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 P4HBP07237 508 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 HSPA1LP34931 641 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 CETN1Q12798 172 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 JAMLQ86YT9 394 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 PAGR1Q9BTK6 254 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 TMEM39BQ9GZU3 492 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 TMEM206Q9H813 350 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 HSPBP1Q9NZL4 362 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 CCPG1Q9ULG6 757 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 SNX24Q9Y343 169 aa21.83■■□□□ 1.09
SHKBP1-225ENST00000600733 RARRES1P49788 294 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 PLTPP55058 493 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 IFFO1Q0D2I5 559 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 FBXW10Q5XX13 1052 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 FAM160B2Q86V87 743 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 SPATS2Q86XZ4 545 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 ACCSQ96QU6 501 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 PCDHB18PQ96TA0 734 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 VEZTQ9HBM0 779 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 BACH1O14867 736 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 SGPL1O95470 568 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 APBA3O96018 575 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 HSD17B4P51659 736 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 HADHBP55084 474 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 C11orf63Q6NUN7 778 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 XXYLT1Q8NBI6 393 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 NEK9Q8TD19 979 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 CYFIP2Q96F07 1278 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 EPB41L4BQ9H329 900 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 EFCC1Q9HA90 598 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 GPRC5CQ9NQ84 441 aa21.82■■□□□ 1.08
SHKBP1-225ENST00000600733 GOLGA8IPA6NC78 632 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 GOLGA8JA6NMD2 632 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 RAD17O75943 681 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 SHBGP04278 402 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 PLS3P13797 630 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 GPC5P78333 572 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 SPP2Q13103 211 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 MESDQ14696 234 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 PPP2R5EQ16537 467 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 ZDHHC14Q8IZN3 488 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 FEM1BQ9UK73 627 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 SYNGAP1Q96PV0 1343 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 GMNCA6NCL1 334 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 SRRM3A6NNA2 597 aaPredicted RBP21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 TRAPPC3O43617 180 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 COMTP21964 271 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 DLGAP5Q15398 846 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 HAUS6Q7Z4H7 955 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 NOP9Q86U38 636 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 CPNE8Q86YQ8 564 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 PRELID2Q8N945 189 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 FLAD1Q8NFF5 587 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 FBXO25Q8TCJ0 367 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 CNKSR1Q969H4 720 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 ZSWIM1Q9BR11 485 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 TMEM117Q9H0C3 514 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 CAPN7Q9Y6W3 813 aa21.81■■□□□ 1.08
SHKBP1-225ENST00000600733 ZNF536O15090 1300 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 KIAA0391O15091 583 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 PLA2G6O60733 806 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 CHRNB2P17787 502 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 CAP2P40123 477 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 IFT88Q13099 833 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 DHX34Q14147 1143 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 ZDHHC24Q6UX98 284 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 MICALCLQ6ZW33 695 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 UBL4BQ8N7F7 174 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 EPS8L1Q8TE68 723 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 ZBTB12Q9Y330 459 aaPredicted RBP21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 FAM187AA6NFU0 413 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 SLC16A4O15374 487 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 C21orf2O43822 256 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 PHF2O75151 1096 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 CAND2O75155 1236 aa21.8■■□□□ 1.08
SHKBP1-225ENST00000600733 ADRB2P07550 413 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms