RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 ABCD1P33897 745 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 AMPD3Q01432 767 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 PPP2R2DQ66LE6 453 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 CNNM3Q8NE01 707 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 DHX58Q96C10 678 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 TMEM134Q9H6X4 195 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 RC3H2Q9HBD1 1191 aaKnown RBP15.23■□□□□ 0.03
SNRPA-208ENST00000600456 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 KBTBD4Q9NVX7 518 aa15.23■□□□□ 0.03
SNRPA-208ENST00000600456 TTC3P53804 2025 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 PTPRSQ13332 1948 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 FAM237AA0A1B0GTK4 181 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 MYMKA6NI61 221 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 K7ERI5 159 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 POLR2DO15514 142 aaKnown RBP15.22■□□□□ 0.03
SNRPA-208ENST00000600456 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
SNRPA-208ENST00000600456 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
SNRPA-208ENST00000600456 PRPF4BQ13523 1007 aaKnown RBP15.22■□□□□ 0.03
SNRPA-208ENST00000600456 ZNF598Q86UK7 904 aaKnown RBP15.22■□□□□ 0.03
SNRPA-208ENST00000600456 CMTR2Q8IYT2 770 aaKnown RBP15.22■□□□□ 0.03
SNRPA-208ENST00000600456 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 DDX12PQ92771 950 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 ZNF689Q96CS4 500 aaPredicted RBP15.22■□□□□ 0.03
SNRPA-208ENST00000600456 PGBD4Q96DM1 585 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 FAM105AQ9NUU6 356 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 USP25Q9UHP3 1055 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 HPSEQ9Y251 543 aa15.22■□□□□ 0.03
SNRPA-208ENST00000600456 LCHNA4D1U4 455 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 LINC01553A4QN01 128 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 B4GALT5O43286 388 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 PFKFB1P16118 471 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 GAP43P17677 238 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 NCKAP1LP55160 1127 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 TAP1Q03518 808 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 CSPP1Q1MSJ5 1256 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 UBXN11Q5T124 520 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 CNNM4Q6P4Q7 775 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 SLC27A1Q6PCB7 646 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 MYCT1Q8N699 235 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 TMEM161BQ8NDZ6 487 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.03
SNRPA-208ENST00000600456 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.03
SNRPA-208ENST00000600456 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 ZNF576Q9H609 170 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 SEL1LQ9UBV2 794 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 PCDHB2Q9Y5E7 798 aa15.21■□□□□ 0.03
SNRPA-208ENST00000600456 LAMA2P24043 3122 aaKnown RBP15.21■□□□□ 0.02
SNRPA-208ENST00000600456 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 N4BP3O15049 544 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 SLC16A4O15374 487 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 TRAK2O60296 914 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 SLFN14P0C7P3 912 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 MAPTP10636 758 aaKnown RBP15.2■□□□□ 0.02
SNRPA-208ENST00000600456 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-208ENST00000600456 STRN3Q13033 797 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 BTG3Q14201 252 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-208ENST00000600456 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 APBB1IPQ7Z5R6 666 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-208ENST00000600456 MRPL10Q7Z7H8 261 aaKnown RBP15.2■□□□□ 0.02
SNRPA-208ENST00000600456 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 HACE1Q8IYU2 909 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 CEP57L1Q8IYX8 460 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 DNAJC19Q96DA6 116 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 CPB2Q96IY4 423 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 MRPL4Q9BYD3 311 aaKnown RBP15.2■□□□□ 0.02
SNRPA-208ENST00000600456 TMEM117Q9H0C3 514 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 TTYH1Q9H313 450 aaPredicted RBP15.2■□□□□ 0.02
SNRPA-208ENST00000600456 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 ST6GALNAC4Q9H4F1 302 aa15.2■□□□□ 0.02
SNRPA-208ENST00000600456 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 FRMD3A2A2Y4 597 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 FGFR1P11362 822 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 LIG1P18858 919 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
SNRPA-208ENST00000600456 SYKP43405 635 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 HAUS6Q7Z4H7 955 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 ABI1Q8IZP0 508 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 DEFB123Q8N688 67 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 RNF169Q8NCN4 708 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
SNRPA-208ENST00000600456 C7orf25Q9BPX7 421 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 ADPGKQ9BRR6 497 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 TRIM9Q9C026 710 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
SNRPA-208ENST00000600456 PDZD7Q9H5P4 517 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 UBN1Q9NPG3 1134 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 TNFSF13BQ9Y275 285 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 RWDD3Q9Y3V2 267 aa15.19■□□□□ 0.02
SNRPA-208ENST00000600456 TBKBP1A7MCY6 615 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms