RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 EDEM3Q9BZQ6 932 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 POLD4Q9HCU8 107 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 LARSQ9P2J5 1176 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 GABBR1Q9UBS5 961 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 LUC7L2Q9Y383 392 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 TRIOBPQ9H2D6 2365 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 GRIN2DO15399 1336 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 K7ENM7 598 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 EPHB6O15197 1021 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 CABYRO75952 493 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 AKAP3O75969 853 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 TIMP1P01033 207 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 TRIM21P19474 475 aaKnown RBP10.3□□□□□ -0.76
VPS25-205ENST00000590339 NPEPPSP55786 919 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 GTF2BQ00403 316 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 FPGSQ05932 587 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 TTLL4Q14679 1199 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 ZC2HC1CQ53FD0 456 aaPredicted RBP10.3□□□□□ -0.76
VPS25-205ENST00000590339 XKR9Q5GH70 373 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 FAM47CQ5HY64 1035 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 MIS18BP1Q6P0N0 1132 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 TRIM65Q6PJ69 517 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 WDR59Q6PJI9 974 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 FAM126BQ8IXS8 530 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 GOLGA5Q8TBA6 731 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 BAP1Q92560 729 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 CCDC43Q96MW1 224 aaKnown RBP10.3□□□□□ -0.76
VPS25-205ENST00000590339 GBP3Q9H0R5 595 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 TRPV6Q9H1D0 765 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 GANQ9H2C0 597 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 METTL14Q9HCE5 456 aaKnown RBP10.3□□□□□ -0.76
VPS25-205ENST00000590339 XPNPEP1Q9NQW7 623 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 AGPAT3Q9NRZ7 376 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 CGNQ9P2M7 1197 aaKnown RBP10.3□□□□□ -0.76
VPS25-205ENST00000590339 ARMCX3Q9UH62 379 aaPredicted RBP10.3□□□□□ -0.76
VPS25-205ENST00000590339 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS25-205ENST00000590339 MAFBQ9Y5Q3 323 aaPredicted RBP10.3□□□□□ -0.76
VPS25-205ENST00000590339 ALPK3Q96L96 1907 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 MROH7Q68CQ1 1323 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 PHLPP2Q6ZVD8 1323 aa10.3□□□□□ -0.76
VPS25-205ENST00000590339 GTPBP10A4D1E9 387 aaKnown RBP10.29□□□□□ -0.76
VPS25-205ENST00000590339 CCDC175P0C221 793 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 ACRP10323 421 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 TGFB3P10600 412 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 EPB41P11171 864 aaKnown RBP10.29□□□□□ -0.76
VPS25-205ENST00000590339 CYP2C18P33260 490 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 GTF2F1P35269 517 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS25-205ENST00000590339 CASP4P49662 377 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 CPT1AP50416 773 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
VPS25-205ENST00000590339 SNRPFP62306 86 aaKnown RBP10.29□□□□□ -0.76
VPS25-205ENST00000590339 BRDTQ58F21 947 aaPredicted RBP10.29□□□□□ -0.76
VPS25-205ENST00000590339 XKR3Q5GH77 459 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 UTP14CQ5TAP6 766 aaKnown RBP10.29□□□□□ -0.76
VPS25-205ENST00000590339 DPY19L2P1Q6NXN4 242 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 OTUD6AQ7L8S5 288 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 HS2ST1Q7LGA3 356 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 DEFB123Q8N688 67 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 MCPH1Q8NEM0 835 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 MYRIPQ8NFW9 859 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 AFAP1L1Q8TED9 768 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 AFG1LQ8WV93 481 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 SPIRE2Q8WWL2 714 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 KIFAP3Q92845 792 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 SLC35C1Q96A29 364 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 FAM161BQ96MY7 647 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 PCYT2Q99447 389 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 DESI2Q9BSY9 194 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 IKZF4Q9H2S9 585 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 C17orf75Q9HAS0 396 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 AGPAT5Q9NUQ2 364 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 CEP72Q9P209 647 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 TBX21Q9UL17 535 aa10.29□□□□□ -0.76
VPS25-205ENST00000590339 GSTTP1A0A1W2PQM5 241 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 CLIC2O15247 247 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 MAPK13O15264 365 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 B4GALT4O60513 344 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 DGAT1O75907 488 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 NOL4O94818 638 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 GH1P01241 217 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 CD4P01730 458 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 AFPP02771 609 aaKnown RBP10.28□□□□□ -0.76
VPS25-205ENST00000590339 OATP04181 439 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 CYP2C9P11712 490 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 CSF2RAP15509 400 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 ATP4AP20648 1035 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 PSMC2P35998 433 aaKnown RBP10.28□□□□□ -0.76
VPS25-205ENST00000590339 CCL23P55773 120 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 ETF1P62495 437 aaKnown RBP10.28□□□□□ -0.76
VPS25-205ENST00000590339 PURAQ00577 322 aaKnown RBP10.28□□□□□ -0.76
VPS25-205ENST00000590339 KCNH2Q12809 1159 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 NEDD9Q14511 834 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 MFSD5Q6N075 450 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 SWSAP1Q6NVH7 229 aa10.28□□□□□ -0.76
VPS25-205ENST00000590339 PDXDC1Q6P996 788 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms