RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CCDC113Q9H0I3 377 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 FZD8Q9H461 694 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 PRMT7Q9NVM4 692 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-203ENST00000580986 PRKAG2Q9UGJ0 569 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 CCDC169A6NNP5 214 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 SFI1A8K8P3 1242 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 GPR182O15218 404 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 EVI5O60447 810 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 KIF20AO95235 890 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 PIGRP01833 764 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 SRGAP2CP0DJJ0 459 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 CASP1P29466 404 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 MBTD1Q05BQ5 628 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 MAPK6Q16659 721 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 ZNF658Q5TYW1 1059 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-203ENST00000580986 MFSD5Q6N075 450 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 HAUS6Q7Z4H7 955 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 MAP4K3Q8IVH8 894 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 KSR1Q8IVT5 923 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 TMEM174Q8WUU8 243 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 APBB2Q92870 758 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 OSMRQ99650 979 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 WNT8AQ9H1J5 351 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 MRPL44Q9H9J2 332 aaKnown RBP11.45□□□□□ -0.58
CCDC47-203ENST00000580986 TMEM63CQ9P1W3 806 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 NR2E3Q9Y5X4 410 aa11.45□□□□□ -0.58
CCDC47-203ENST00000580986 CNTNAP2Q9UHC6 1331 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 DENND3A2RUS2 1198 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 TRIM43BA6NCK2 446 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 K7ENM7 598 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 K7ERI5 159 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 ACKR2O00590 384 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 RAG1P15918 1043 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 SNRPFP62306 86 aaKnown RBP11.44□□□□□ -0.58
CCDC47-203ENST00000580986 MORC3Q14149 939 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 MBTPS1Q14703 1052 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 CAMK4Q16566 473 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 AMHR2Q16671 573 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 PLEKHG4Q58EX7 1191 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 CT47A1Q5JQC4 288 aaPredicted RBP11.44□□□□□ -0.58
CCDC47-203ENST00000580986 L1TD1Q5T7N2 865 aaKnown RBP11.44□□□□□ -0.58
CCDC47-203ENST00000580986 ZPBP2Q6X784 338 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 GUF1Q8N442 669 aaKnown RBP11.44□□□□□ -0.58
CCDC47-203ENST00000580986 TMEM199Q8N511 208 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 KIAA0895Q8NCT3 520 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 ZNF507Q8TCN5 953 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 TMEM40Q8WWA1 233 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 TRIM43Q96BQ3 446 aaPredicted RBP11.44□□□□□ -0.58
CCDC47-203ENST00000580986 CCDC51Q96ER9 411 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 SCLT1Q96NL6 688 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 TRAIPQ9BWF2 469 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 ZHX3Q9H4I2 956 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 TMEM206Q9H813 350 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 CHST12Q9NRB3 414 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 AGPAT5Q9NUQ2 364 aa11.44□□□□□ -0.58
CCDC47-203ENST00000580986 CGNQ9P2M7 1197 aaKnown RBP11.44□□□□□ -0.58
CCDC47-203ENST00000580986 UMODL1Q5DID0 1318 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 INO80B-WBP1J3KQ70 363 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 SLC16A4O15374 487 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 RPS6KA5O75582 802 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 ERLIN2O94905 339 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 GCNT3O95395 438 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 PRKCBP05771 671 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 CTSHP09668 335 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 NCBP1Q09161 790 aaKnown RBP11.43□□□□□ -0.58
CCDC47-203ENST00000580986 TMEM62Q0P6H9 643 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 STRN3Q13033 797 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 STK4Q13043 487 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 LPIN1Q14693 890 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 GPNMBQ14956 572 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 CAVIN1Q6NZI2 390 aaKnown RBP11.43□□□□□ -0.58
CCDC47-203ENST00000580986 TAS1R3Q7RTX0 852 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 FAM228AQ86W67 206 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 MRPL4Q9BYD3 311 aaKnown RBP11.43□□□□□ -0.58
CCDC47-203ENST00000580986 MINDY3Q9H8M7 445 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 CDHR5Q9HBB8 845 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 ERVK-5Q9HDB9 667 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 MAN1B1Q9UKM7 699 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 EXOC7Q9UPT5 735 aa11.43□□□□□ -0.58
CCDC47-203ENST00000580986 A0A1B0GUA9 196 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 TSPAN1O60635 241 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 NBNO60934 754 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 EFCAB14O75071 495 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 GHRP10912 638 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 ITGB8P26012 769 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 NMT1P30419 496 aaKnown RBP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 CASP5P51878 434 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 PAK2Q13177 524 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 PPIGQ13427 754 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 NFIL3Q16649 462 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 C12orf56Q8IXR9 622 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 C7orf61Q8IZ16 206 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 RPUSD2Q8IZ73 545 aaKnown RBP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 MYOCDQ8IZQ8 938 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 MLKLQ8NB16 471 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 GOLGA5Q8TBA6 731 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms