RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SCN7AQ01118 1682 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 TMCO5BA8MYB1 307 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 CLIC2O15247 247 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 ACTN1P12814 892 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 ACTN2P35609 894 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 GGCXP38435 758 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 IDH3AP50213 366 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 UBXN2AP68543 259 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 PPARDQ03181 441 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 TMEM119Q4V9L6 283 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 HAUS3Q68CZ6 603 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 DNAAF5Q86Y56 855 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 DNAJC19Q96DA6 116 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 MTMR8Q96EF0 704 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 CCDC17Q96LX7 622 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 MED4Q9NPJ6 270 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 ATP6V0A2Q9Y487 856 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 CASZ1Q86V15 1759 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 EDIL3O43854 480 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 MED24O75448 989 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 GCNT3O95395 438 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 ZIC2O95409 532 aaPredicted RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 CFBP00751 764 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 CYP11B2P19099 503 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 KCNMA1Q12791 1236 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 GRIN2CQ14957 1233 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 ZYXQ15942 572 aaKnown RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 CCNI2Q6ZMN8 369 aaPredicted RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 FBXO11Q86XK2 927 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 SFR1Q86XK3 245 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 C10orf67Q8IYJ2 551 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 SHDQ96IW2 340 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 RSRP1Q9BUV0 290 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 AMNQ9BXJ7 453 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 CENPHQ9H3R5 247 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 SEPT11Q9NVA2 429 aaKnown RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 ARMCX3Q9UH62 379 aaPredicted RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 KCNG1Q9UIX4 513 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 AFF2P51816 1311 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 ESYT3A0FGR9 886 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 DDTLA6NHG4 134 aaPredicted RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 ANKRD65E5RJM6 399 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 F5H6K3 240 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 POLRMTO00411 1230 aaKnown RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 PALMO75781 387 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 SERPING1P05155 500 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 VIL1P09327 827 aaKnown RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 HOXA10P31260 410 aaPredicted RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 PSMC6P62333 389 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 CDK17Q00537 523 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 KLRC3Q07444 240 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 HLTFQ14527 1009 aaKnown RBP eCLIP5.84□□□□□ -1.47
VAPA-203ENST00000577539 PLS1Q14651 629 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 APOBEC3HQ6NTF7 200 aaKnown RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 CREG2Q8IUH2 290 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 KLHL7Q8IXQ5 586 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 GOLGA5Q8TBA6 731 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 SCFD1Q8WVM8 642 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 NAP1L4Q99733 375 aaKnown RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 ZCCHC2Q9C0B9 1178 aaKnown RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 BHMT2Q9H2M3 363 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 DHX36Q9H2U1 1008 aaKnown RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 CEP72Q9P209 647 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 HPCAL4Q9UM19 191 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 CCDC88AQ3V6T2 1871 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 GOLGA6CA6NDK9 693 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 SPINT1O43278 529 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 EFSO43281 561 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 GNA14O95837 355 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 GH2P01242 217 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 GOLGA6DP0CG33 693 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 SNHG28P0DPA3 235 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 GUCY2FP51841 1108 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 ABCB5Q2M3G0 1257 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 CFAP221Q4G0U5 840 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 TTC19Q6DKK2 380 aaPredicted RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 SLFN12Q8IYM2 578 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 PIGOQ8TEQ8 1089 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 GOLPH3Q9H4A6 298 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 TDRD3Q9H7E2 651 aaKnown RBP5.84□□□□□ -1.47
VAPA-203ENST00000577539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.84□□□□□ -1.47
VAPA-203ENST00000577539 GOLGA6AQ9NYA3 693 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 RGL1Q9NZL6 768 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 PI4KBQ9UBF8 816 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 HDAC9Q9UKV0 1011 aa5.84□□□□□ -1.47
VAPA-203ENST00000577539 A0A087X0T9 212 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 RSPH10B2B2RC85 870 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 MMP10P09238 476 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 FAM228BP0C875 321 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 RSPH10BP0C881 870 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 XRCC5P13010 732 aaKnown RBP5.84□□□□□ -1.48
VAPA-203ENST00000577539 SLC9A1P19634 815 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 KLRC1P26715 233 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 GUCY2DQ02846 1103 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 CCDC174Q6PII3 467 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 CATSPER3Q86XQ3 398 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 TPH2Q8IWU9 490 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 FAM76AQ8TAV0 307 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 CYP2W1Q8TAV3 490 aa5.84□□□□□ -1.48
VAPA-203ENST00000577539 CEP63Q96MT8 703 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms