RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 AKAP3O75969 853 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 EPB41P11171 864 aaKnown RBP33.46■■■□□ 2.95
CTCF-203ENST00000566078 LIG4P49917 911 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 MARSP56192 900 aaKnown RBP33.46■■■□□ 2.95
CTCF-203ENST00000566078 PTENP60484 403 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 MYBPC2Q14324 1141 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 NR1I3Q14994 352 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 NOC4LQ9BVI4 516 aaKnown RBP33.46■■■□□ 2.95
CTCF-203ENST00000566078 GTF2IRD1Q9UHL9 959 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 A0A087WZ62 844 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 EDN1P05305 212 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 PRKCBP05771 671 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 ACLYP53396 1101 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 FAM47CQ5HY64 1035 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 NLRP7Q8WX94 980 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 FDXACB1Q9BRP7 624 aaPredicted RBP33.46■■■□□ 2.95
CTCF-203ENST00000566078 NFKBIZQ9BYH8 718 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 HSPBP1Q9NZL4 362 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 USP20Q9Y2K6 914 aa33.46■■■□□ 2.95
CTCF-203ENST00000566078 PES1O00541 588 aaKnown RBP33.45■■■□□ 2.95
CTCF-203ENST00000566078 PIGRP01833 764 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 GPC3P51654 580 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 POU5F1BQ06416 359 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 MAPK6Q16659 721 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 TMEM174Q8WUU8 243 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 SCLT1Q96NL6 688 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 IFT122Q9HBG6 1241 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 FRMD4BQ9Y2L6 1034 aa33.45■■■□□ 2.95
CTCF-203ENST00000566078 INO80B-WBP1J3KQ70 363 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 TEX33O43247 280 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 EXOC3O60645 756 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 CABYRO75952 493 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 MYCP01106 439 aaPredicted RBP33.44■■■□□ 2.94
CTCF-203ENST00000566078 ADSSP30520 456 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 MBTD1Q05BQ5 628 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 MAN2A1Q16706 1144 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 PTPN21Q16825 1174 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 FRMD5Q7Z6J6 570 aa33.44■■■□□ 2.94
CTCF-203ENST00000566078 INO80BQ9C086 356 aaPredicted RBP33.44■■■□□ 2.94
CTCF-203ENST00000566078 MOXD2PA6NHM9 499 aa33.43■■■□□ 2.94
CTCF-203ENST00000566078 LGALS16A8MUM7 142 aa33.43■■■□□ 2.94
CTCF-203ENST00000566078 PSMC2P35998 433 aaKnown RBP33.43■■■□□ 2.94
CTCF-203ENST00000566078 NLRP11P59045 1033 aaKnown RBP33.43■■■□□ 2.94
CTCF-203ENST00000566078 MIIPQ5JXC2 388 aa33.43■■■□□ 2.94
CTCF-203ENST00000566078 ZNF410Q86VK4 478 aa33.43■■■□□ 2.94
CTCF-203ENST00000566078 FAM186BQ8IYM0 893 aa33.43■■■□□ 2.94
CTCF-203ENST00000566078 POMGNT1Q8WZA1 660 aa33.43■■■□□ 2.94
CTCF-203ENST00000566078 TSEN34Q9BSV6 310 aaKnown RBP33.43■■■□□ 2.94
CTCF-203ENST00000566078 MKNK1Q9BUB5 465 aa33.43■■■□□ 2.94
CTCF-203ENST00000566078 TARS2Q9BW92 718 aaKnown RBP33.43■■■□□ 2.94
CTCF-203ENST00000566078 ARMCX3Q9UH62 379 aaPredicted RBP33.43■■■□□ 2.94
CTCF-203ENST00000566078 TMEM62Q0P6H9 643 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 MTFR1Q15390 333 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 GDF6Q6KF10 455 aaPredicted RBP33.42■■■□□ 2.94
CTCF-203ENST00000566078 TMC6Q7Z403 805 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 CTU1Q7Z7A3 348 aaKnown RBP33.42■■■□□ 2.94
CTCF-203ENST00000566078 IFNLR1Q8IU57 520 aaPredicted RBP33.42■■■□□ 2.94
CTCF-203ENST00000566078 XXYLT1Q8NBI6 393 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 DNAJB3Q8WWF6 145 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 MRPL4Q9BYD3 311 aaKnown RBP33.42■■■□□ 2.94
CTCF-203ENST00000566078 MINDY3Q9H8M7 445 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 VSTM4Q8IW00 320 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 TRIM59Q8IWR1 403 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 ARRDC4Q8NCT1 418 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 VTI1AQ96AJ9 217 aa33.42■■■□□ 2.94
CTCF-203ENST00000566078 METTL14Q9HCE5 456 aaKnown RBP33.42■■■□□ 2.94
CTCF-203ENST00000566078 PAK6Q9NQU5 681 aaPredicted RBP33.42■■■□□ 2.94
CTCF-203ENST00000566078 DNAH12Q6ZR08 3092 aa33.41■■■□□ 2.94
CTCF-203ENST00000566078 GRIN2DO15399 1336 aa33.41■■■□□ 2.94
CTCF-203ENST00000566078 GARTP22102 1010 aa33.41■■■□□ 2.94
CTCF-203ENST00000566078 VWA3BQ502W6 1294 aa33.41■■■□□ 2.94
CTCF-203ENST00000566078 SESTD1Q86VW0 696 aa33.41■■■□□ 2.94
CTCF-203ENST00000566078 FZD8Q9H461 694 aa33.41■■■□□ 2.94
CTCF-203ENST00000566078 CCL5P13501 91 aa33.4■■■□□ 2.94
CTCF-203ENST00000566078 UBXN1Q04323 297 aa33.4■■■□□ 2.94
CTCF-203ENST00000566078 KIZQ2M2Z5 673 aa33.4■■■□□ 2.94
CTCF-203ENST00000566078 ZSWIM2Q8NEG5 633 aa33.4■■■□□ 2.94
CTCF-203ENST00000566078 PRMT7Q9NVM4 692 aaPredicted RBP33.4■■■□□ 2.94
CTCF-203ENST00000566078 CDC42EP1Q00587 391 aa33.39■■■□□ 2.94
CTCF-203ENST00000566078 ZPBP2Q6X784 338 aa33.39■■■□□ 2.94
CTCF-203ENST00000566078 SAAL1Q96ER3 474 aa33.39■■■□□ 2.94
CTCF-203ENST00000566078 GLT1D1Q96MS3 346 aa33.39■■■□□ 2.94
CTCF-203ENST00000566078 ADAMTS10Q9H324 1103 aa33.39■■■□□ 2.94
CTCF-203ENST00000566078 ANKFY1Q9P2R3 1169 aa33.39■■■□□ 2.94
CTCF-203ENST00000566078 UTP18Q9Y5J1 556 aaKnown RBP eCLIP33.39■■■□□ 2.94
CTCF-203ENST00000566078 BRCA2P51587 3418 aa33.39■■■□□ 2.94
CTCF-203ENST00000566078 TTLL13PA6NNM8 815 aa33.39■■■□□ 2.93
CTCF-203ENST00000566078 ACKR2O00590 384 aa33.39■■■□□ 2.93
CTCF-203ENST00000566078 PTMAP06454 111 aaKnown RBP33.39■■■□□ 2.93
CTCF-203ENST00000566078 ITGA7Q13683 1181 aa33.39■■■□□ 2.93
CTCF-203ENST00000566078 TAF2Q6P1X5 1199 aa33.39■■■□□ 2.93
CTCF-203ENST00000566078 RDH13Q8NBN7 331 aa33.39■■■□□ 2.93
CTCF-203ENST00000566078 NDST4Q9H3R1 872 aa33.39■■■□□ 2.93
CTCF-203ENST00000566078 STYXL1Q9Y6J8 313 aa33.39■■■□□ 2.93
CTCF-203ENST00000566078 GOLGA8IPA6NC78 632 aa33.38■■■□□ 2.93
CTCF-203ENST00000566078 GOLGA8JA6NMD2 632 aa33.38■■■□□ 2.93
CTCF-203ENST00000566078 KBTBD13C9JR72 458 aa33.38■■■□□ 2.93
CTCF-203ENST00000566078 GPR32O75388 356 aa33.38■■■□□ 2.93
CTCF-203ENST00000566078 IQCF3P0C7M6 154 aa33.38■■■□□ 2.93
CTCF-203ENST00000566078 MATR3P43243 847 aaKnown RBP eCLIP33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 898.4 ms