RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 WDR11Q9BZH6 1224 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ISY1Q9ULR0 285 aaKnown RBP7.06□□□□□ -1.28
UBFD1-204ENST00000565634 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 USP15Q9Y4E8 981 aaPredicted RBP7.06□□□□□ -1.28
UBFD1-204ENST00000565634 SLC12A7Q9Y666 1083 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 FANCMQ8IYD8 2048 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 USP24Q9UPU5 2620 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ZFHX4Q86UP3 3567 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 SDK1Q7Z5N4 2213 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 FRYLO94915 3013 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 ERICH2A1L162 156 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 GOLGA8AA7E2F4 631 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 GOLGA8BA8MQT2 603 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 RECKO95980 971 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 ALAS1P13196 640 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 DNAJB1P25685 340 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 MAPK1P28482 360 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 ATP1A2P50993 1020 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 SEC13P55735 322 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 HTRA4P83105 476 aaPredicted RBP7.05□□□□□ -1.28
UBFD1-204ENST00000565634 FGD1P98174 961 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 CAMK1Q14012 370 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 CCDC96Q2M329 555 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 BTNL9Q6UXG8 535 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 CATIPQ7Z7H3 387 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 TMTC2Q8N394 836 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 FLCNQ8NFG4 579 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 RIN2Q8WYP3 895 aaPredicted RBP7.05□□□□□ -1.28
UBFD1-204ENST00000565634 MSLNLQ96KJ4 702 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 RIOX1Q9H6W3 641 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 UPF2Q9HAU5 1272 aaKnown RBP7.05□□□□□ -1.28
UBFD1-204ENST00000565634 A1CFQ9NQ94 594 aaKnown RBP7.05□□□□□ -1.28
UBFD1-204ENST00000565634 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
UBFD1-204ENST00000565634 TCHHQ07283 1943 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 ASB14A6NK59 587 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 M0R082 166 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 OPLAHO14841 1288 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 SORBS3O60504 671 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 ASGR2P07307 311 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 PARP1P09874 1014 aaKnown RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 NRIP1P48552 1158 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 METAP2P50579 478 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 CBX2Q14781 532 aaPredicted RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 RTN1Q16799 776 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 PTPN21Q16825 1174 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 DUSP28Q4G0W2 176 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 CCDC178Q5BJE1 867 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 SYDE2Q5VT97 1194 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 NSMFQ6X4W1 530 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 TMTC3Q6ZXV5 915 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 GLYCTKQ8IVS8 523 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 PRPF38AQ8NAV1 312 aaKnown RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 KREMEN2Q8NCW0 462 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 NSUN7Q8NE18 718 aaKnown RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF417Q8TAU3 575 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 DCAF4Q8WV16 495 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 TNFRSF25Q93038 417 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 MTMR8Q96EF0 704 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF587Q96SQ5 575 aaPredicted RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 MTA3Q9BTC8 594 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 SLKQ9H2G2 1235 aaPredicted RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 RNF146Q9NTX7 359 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 HDAC6Q9UBN7 1215 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 GPC6Q9Y625 555 aaPredicted RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 CNOT1A5YKK6 2376 aaKnown RBP7.04□□□□□ -1.28
UBFD1-204ENST00000565634 GPR179Q6PRD1 2367 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 DOCK5Q9H7D0 1870 aa7.04□□□□□ -1.28
UBFD1-204ENST00000565634 FAM208BQ5VWN6 2430 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 EDIL3O43854 480 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 DDAH1O94760 285 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 EYA4O95677 639 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 GLP2RO95838 553 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 ALBP02768 609 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 CXCL10P02778 98 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 AMHP03971 560 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 ICAM3P32942 547 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 COPB2P35606 906 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 ATXN1P54253 815 aaKnown RBP7.03□□□□□ -1.28
UBFD1-204ENST00000565634 ARHGAP4P98171 946 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 GUCY1B3Q02153 619 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 SPEM2Q0P670 501 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 CUL4AQ13619 759 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 SART3Q15020 963 aaKnown RBP7.03□□□□□ -1.28
UBFD1-204ENST00000565634 ANGPT1Q15389 498 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 QRICH1Q2TAL8 776 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 NKAPLQ5M9Q1 402 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 RAB44Q7Z6P3 723 aaPredicted RBP7.03□□□□□ -1.28
UBFD1-204ENST00000565634 HOMER1Q86YM7 354 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 CHST13Q8NET6 341 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 AFAP1L1Q8TED9 768 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 GTF3C6Q969F1 213 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 SNX21Q969T3 373 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 HSH2DQ96JZ2 352 aa7.03□□□□□ -1.28
UBFD1-204ENST00000565634 PHF7Q9BWX1 381 aaPredicted RBP7.03□□□□□ -1.28
UBFD1-204ENST00000565634 SLC26A6Q9BXS9 759 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms