RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SLC16A4O15374 487 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 ATF7P17544 494 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 ARF4P18085 180 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 IGFBP4P22692 258 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 AXLP30530 894 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 CTNNB1P35222 781 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 DDIT3P35638 169 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 RAB27AP51159 221 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 PRPF4BQ13523 1007 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 PCBP1Q15365 356 aaKnown RBP eCLIP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 MAPK6Q16659 721 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 SPOUT1Q5T280 376 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 SHC4Q6S5L8 630 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 CMTR2Q8IYT2 770 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 FBXO22Q8NEZ5 403 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 HELQQ8TDG4 1101 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 EIF2AQ9BY44 585 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 TRIM6Q9C030 488 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 CCDC113Q9H0I3 377 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 HCSTQ9UBK5 93 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 PCDHB2Q9Y5E7 798 aa17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-206ENST00000558649 TTLL13PA6NNM8 815 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 HOXA2O43364 376 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 TBCAO75347 108 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 FAM13AO94988 1023 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 NPTXRO95502 500 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 EDN1P05305 212 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 SKIP12755 728 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 PLS3P13797 630 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 EFNA5P52803 228 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 ERVK-21P61565 698 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 NUCB2P80303 420 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 NAALADL2Q58DX5 795 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 CLLU1OSQ5K130 101 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 UBXN11Q5T124 520 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 AXDND1Q5T1B0 1012 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 TMEM192Q8IY95 271 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 LEO1Q8WVC0 666 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 RNF19AQ9NV58 838 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 ODF2LQ9ULJ1 636 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 INPP5FQ9Y2H2 1132 aa17.48■□□□□ 0.39
RABGGTA-206ENST00000558649 PHLPP2Q6ZVD8 1323 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 CNTNAP2Q9UHC6 1331 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 MEIS3P2A8K0S8 358 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 K7ERI5 159 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 EOMESO95936 686 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 GIT2Q14161 759 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 EPC2Q52LR7 807 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 SV2BQ7L1I2 683 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 ZNF598Q86UK7 904 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 MICALL1Q8N3F8 863 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 MYCT1Q8N699 235 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 DHX58Q96C10 678 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 PRIMPOLQ96LW4 560 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 CASD1Q96PB1 797 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 TRAIPQ9BWF2 469 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 TMEM117Q9H0C3 514 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 FZD8Q9H461 694 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 FAM13BQ9NYF5 915 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 CHD9Q3L8U1 2897 aa17.47■□□□□ 0.39
RABGGTA-206ENST00000558649 SMTNP53814 917 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 ADGRE1Q14246 886 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 FAM187BQ17R55 369 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 RESP18Q5W5W9 173 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 SLC27A1Q6PCB7 646 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 STAMQ92783 540 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 PGBD4Q96DM1 585 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 CCDC51Q96ER9 411 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 NXF3Q9H4D5 531 aaKnown RBP17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 PDZD7Q9H5P4 517 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 C17orf75Q9HAS0 396 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 LARSQ9P2J5 1176 aaKnown RBP17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 HES2Q9Y543 173 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 IPPQ9Y573 584 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 CDH23Q9H251 3354 aa17.46■□□□□ 0.39
RABGGTA-206ENST00000558649 MYMKA6NI61 221 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 K7ENM7 598 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 ACKR2O00590 384 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 N4BP3O15049 544 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 CSPG5O95196 566 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 ITGA4P13612 1032 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 GLB1LQ6UWU2 654 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 LRRC43Q8N309 656 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 SMG8Q8ND04 991 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 DDX12PQ92771 950 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 SAMD11Q96NU1 681 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 PARVGQ9HBI0 331 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 TYW1Q9NV66 732 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 ARHGAP28Q9P2N2 729 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 STXBP5LQ9Y2K9 1186 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 RWDD3Q9Y3V2 267 aa17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 RBM19Q9Y4C8 960 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-206ENST00000558649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms