RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	GOLGA6L9	A6NEM1	432 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	LRRC53	A6NM62	1247 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	TLR2	O60603	784 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	EXOC3	O60645	756 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	PIGR	P01833	764 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	CCDC175	P0C221	793 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ACTN1	P12814	892 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ARHGAP25	P42331	645 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	NAMPT	P43490	491 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	FMO5	P49326	533 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	SLC26A2	P50443	739 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ETF1	P62495	437 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	BFSP1	Q12934	665 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	DRP2	Q13474	957 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	CBWD6	Q4V339	395 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	CBWD3	Q5JTY5	395 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	CBWD5	Q5RIA9	395 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	HGSNAT	Q68CP4	663 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ZNF662	Q6ZS27	426 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	RRAGA	Q7L523	313 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	TRIM50	Q86XT4	487 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	CCDC170	Q8IYT3	715 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	MSL3	Q8N5Y2	521 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	XXYLT1	Q8NBI6	393 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	IFT74	Q96LB3	600 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	AZI2	Q9H6S1	392 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	FRMD4B	Q9Y2L6	1034 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	STYXL1	Q9Y6J8	313 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	IVNS1ABP	Q9Y6Y0	642 aa		10.35	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ZNF236	Q9UL36	1845 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	EIF3CL	B5ME19	914 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142		H0YCG3	227 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ZNF263	O14978	683 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	PMM2	O15305	246 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	LCA5L	O95447	670 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ABL1	P00519	1130 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	GH1	P01241	217 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	EDN1	P05305	212 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ADRB2	P07550	413 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	PLEK	P08567	350 aa	Predicted RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	HOXC6	P09630	235 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	HOXD8	P13378	290 aa	Predicted RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	GART	P22102	1010 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	SCP2	P22307	547 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ABCD1	P33897	745 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ADCYAP1R1	P41586	468 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	POLR2F	P61218	127 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	DLG4	P78352	724 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	ENPEP	Q07075	957 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	EXOC3L4	Q17RC7	722 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	SLC9C1	Q4G0N8	1177 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	BRDT	Q58F21	947 aa	Predicted RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	GJC2	Q5T442	439 aa	Predicted RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	IER5	Q5VY09	327 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	GBP6	Q6ZN66	633 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	INTS8	Q75QN2	995 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	DPP9	Q86TI2	863 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	RDH13	Q8NBN7	331 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	LMO3	Q8TAP4	145 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	MFSD14A	Q96MC6	490 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	EIF3C	Q99613	913 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	TINF2	Q9BSI4	451 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	SMARCAD1	Q9H4L7	1026 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	TMEM134	Q9H6X4	195 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	AIPL1	Q9NZN9	384 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	PAXBP1	Q9Y5B6	917 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	BRCA2	P51587	3418 aa		10.34	□□□□□ -0.75
HNRNPC-223	ENST00000556142	NOP56	O00567	594 aa	Known RBP	10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	HBP1	O60381	514 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	TRIM49	P0CI25	452 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	TRIM49C	P0CI26	452 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	UCHL3	P15374	230 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	SMPD1	P17405	629 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	MARK3	P27448	753 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	VAMP7	P51809	220 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	JAM2	P57087	298 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	MAP2K5	Q13163	448 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	IRF5	Q13568	498 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	ACVR2B	Q13705	512 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	CAPS	Q13938	189 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	ARHGEF6	Q15052	776 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	TSR1	Q2NL82	804 aa	Known RBP	10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	TCERG1L	Q5VWI1	586 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	IQSEC1	Q6DN90	963 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	SYT10	Q6XYQ8	523 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	PPTC7	Q8NI37	304 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	SLC7A3	Q8WY07	619 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	GLG1	Q92896	1179 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	HAPLN2	Q9GZV7	340 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	NUCKS1	Q9H1E3	243 aa	Known RBP	10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	RNPEP	Q9H4A4	650 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	NLRC4	Q9NPP4	1024 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	GJD2	Q9UKL4	321 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	MYO6	Q9UM54	1294 aa		10.33	□□□□□ -0.76
HNRNPC-223	ENST00000556142	USP20	Q9Y2K6	914 aa		10.33	□□□□□ -0.76

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