RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ATP6V1G2O95670 118 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 RPA1P27694 616 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 JAM2P57087 298 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 PTENP60484 403 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 SRRM1Q8IYB3 904 aaKnown RBP18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 SPOCK2Q92563 424 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 PCDHB18PQ96TA0 734 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 ATF5Q9Y2D1 282 aaPredicted RBP18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 TOM1O60784 492 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 GJB6O95452 261 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 SERPINB2P05120 415 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 POU5F1Q01860 360 aaKnown RBP18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 PPP2R5AQ15172 486 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 SPATS2Q86XZ4 545 aaKnown RBP18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 LENG9Q96B70 501 aa18.37■□□□□ 0.53
PPP4R3A-208ENST00000555462 TMEM120BA0PK00 339 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 O00370 1275 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 IGF2BP3O00425 579 aaKnown RBP eCLIP18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 GH2P01242 217 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 HOOK3Q86VS8 718 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 ARHGEF2Q92974 986 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 USTQ9Y2C2 406 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 GSTTP1A0A1W2PQM5 241 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 K7ENM7 598 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 HLA-DOAP06340 250 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 RARAP10276 462 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 GABPAQ06546 454 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 TRPM8Q7Z2W7 1104 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 AGAP11Q8TF27 550 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 GPR88Q9GZN0 384 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 GRHL1Q9NZI5 618 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 MCM8Q9UJA3 840 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 H0Y3Z8 333 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 PSMC4P43686 418 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 PREPLQ4J6C6 727 aaPredicted RBP18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 AGBL2Q5U5Z8 902 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 YTHDF3Q7Z739 585 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 CCDC50Q8IVM0 306 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 ZNF317Q96PQ6 595 aaPredicted RBP18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 WDR18Q9BV38 432 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
PPP4R3A-208ENST00000555462 PPFIA2O75334 1257 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 SLITRK3O94933 977 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 ARP10275 920 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 SEMA3FQ13275 785 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 CYP4X1Q8N118 509 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 ATXN2LQ8WWM7 1075 aaKnown RBP18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 AGPAT1Q99943 283 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 PARVGQ9HBI0 331 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 AGPAT3Q9NRZ7 376 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 CHST7Q9NS84 486 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 NDUFB10O96000 172 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 MPP2Q14168 576 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 GPATCH4Q5T3I0 446 aaKnown RBP18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 SLFN11Q7Z7L1 901 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 EXOC3L1Q86VI1 746 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 SLFN12Q8IYM2 578 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 STK33Q9BYT3 514 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 APEX2Q9UBZ4 518 aa18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 TTC7AQ9ULT0 858 aaPredicted RBP18.35■□□□□ 0.53
PPP4R3A-208ENST00000555462 CCDC169A6NNP5 214 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 GAS7O60861 476 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 KRT5P13647 590 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 LMNB1P20700 586 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 MARSP56192 900 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 PASD1Q8IV76 773 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 RASGEF1CQ8N431 466 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 ACSF2Q96CM8 615 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 HAUS1Q96CS2 278 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 KLHL29Q96CT2 875 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 TMEM237Q96Q45 408 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 AMNQ9BXJ7 453 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 TRPC6Q9Y210 931 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 ANP32DO95626 131 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 CYP3A4P08684 503 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 VCAM1P19320 739 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 AUHQ13825 339 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 SYCP2LQ5T4T6 812 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 ZNF653Q96CK0 615 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 NUP85Q9BW27 656 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 ACTR5Q9H9F9 607 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 FBXO28Q9NVF7 368 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 WDR91A4D1P6 747 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 PRKCIP41743 596 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 SEL1L2Q5TEA6 688 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 KAZNQ674X7 775 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 TLCD1Q96CP7 247 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 CDC42EP4Q9H3Q1 356 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 METTL14Q9HCE5 456 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 ARHGEF10LQ9HCE6 1279 aa18.34■□□□□ 0.53
PPP4R3A-208ENST00000555462 ZMYM2Q9UBW7 1377 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 PFASO15067 1338 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms