RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 N4BP1O75113 896 aaKnown RBP11.9□□□□□ -0.5
PABPN1-203ENST00000553960 HSPA6P17066 643 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 RFX1P22670 979 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 MTIF2P46199 727 aaKnown RBP11.9□□□□□ -0.5
PABPN1-203ENST00000553960 PSEN2P49810 448 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 MCL1Q07820 350 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 STRN3Q13033 797 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 PRAMEF19Q5SWL8 479 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 DPY19L2P1Q6NXN4 242 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 EFCAB12Q6NXP0 572 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 NFRKBQ6P4R8 1299 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 SLC39A4Q6P5W5 647 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 TSHZ1Q6ZSZ6 1077 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 FMNL3Q8IVF7 1028 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 ZBTB8OSQ8IWT0 167 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 NELFCDQ8IXH7 590 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 SYCP3Q8IZU3 236 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 DEPTORQ8TB45 409 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 FAXDC2Q96IV6 333 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 TSPAN18Q96SJ8 248 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 DNAJC7Q99615 494 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 PRMT7Q9NVM4 692 aaPredicted RBP11.9□□□□□ -0.5
PABPN1-203ENST00000553960 WBP1LQ9NX94 342 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
PABPN1-203ENST00000553960 TNFSF13BQ9Y275 285 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
PABPN1-203ENST00000553960 SQORQ9Y6N5 450 aa11.9□□□□□ -0.5
PABPN1-203ENST00000553960 MOXD2PA6NHM9 499 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 CCDC169A6NNP5 214 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 EXTL3O43909 919 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 FAM189A1O60320 539 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 CAND2O75155 1236 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 SMIM10L2AP0DMW4 78 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 SMIM10L2BP0DMW5 78 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 PHKA2P46019 1235 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 AP3M2P53677 418 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 UBXN1Q04323 297 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 BFSP1Q12934 665 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 MFSD10Q14728 455 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 MEA1Q16626 185 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 MAPK6Q16659 721 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 KIAA0753Q2KHM9 967 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 CCDC186Q7Z3E2 898 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 FAM186BQ8IYM0 893 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 TC2NQ8N9U0 490 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 SLC43A3Q8NBI5 491 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 LMBR1Q8WVP7 490 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 TMEM143Q96AN5 459 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 MAP7D2Q96T17 732 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 MRPL4Q9BYD3 311 aaKnown RBP11.89□□□□□ -0.51
PABPN1-203ENST00000553960 INO80BQ9C086 356 aaPredicted RBP11.89□□□□□ -0.51
PABPN1-203ENST00000553960 VPS16Q9H269 839 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 ADAMTS10Q9H324 1103 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
PABPN1-203ENST00000553960 CNTNAP2Q9UHC6 1331 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 HNRNPDLO14979 420 aaKnown RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 NRDCO43847 1150 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 AFPP02771 609 aaKnown RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 GYPCP04921 128 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 ANXA13P27216 316 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 AXLP30530 894 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 ZBED6P86452 979 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 MBTD1Q05BQ5 628 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 RBL2Q08999 1139 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 KCNH2Q12809 1159 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 SURF1Q15526 300 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 AMHR2Q16671 573 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 CCDC40Q4G0X9 1142 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 TMC6Q7Z403 805 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 GPD1LQ8N335 351 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 PARD3BQ8TEW8 1205 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 CACTINQ8WUQ7 758 aaKnown RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 ZNF296Q8WUU4 475 aaPredicted RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 ACO2Q99798 780 aaKnown RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 SH2D3AQ9BRG2 576 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 FAM124BQ9H5Z6 455 aaPredicted RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 TAB2Q9NYJ8 693 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 DDX20Q9UHI6 824 aaKnown RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 GTF2IRD1Q9UHL9 959 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 PLAGL2Q9UPG8 496 aa11.88□□□□□ -0.51
PABPN1-203ENST00000553960 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.88□□□□□ -0.51
PABPN1-203ENST00000553960 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 AKR1B15C9JRZ8 316 aaPredicted RBP11.87□□□□□ -0.51
PABPN1-203ENST00000553960 ANKRD63C9JTQ0 380 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 EXOC3O60645 756 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 MFAP3LO75121 409 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 ZC3H11AO75152 810 aaKnown RBP eCLIP11.87□□□□□ -0.51
PABPN1-203ENST00000553960 TPM1P09493 284 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 ZNF286BP0CG31 522 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 MARK3P27448 753 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 CASP4P49662 377 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 GPC3P51654 580 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 DRP2Q13474 957 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 PSMD6Q15008 389 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms