RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 SNRNP35Q16560 246 aaKnown RBP21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 TSR1Q2NL82 804 aaKnown RBP21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 CBWD6Q4V339 395 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 CBWD3Q5JTY5 395 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 CBWD5Q5RIA9 395 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 C1orf220Q5T0J3 134 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 CDCA2Q69YH5 1023 aaPredicted RBP21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 EFCAB12Q6NXP0 572 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 CBWD2Q8IUF1 395 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 REXO1L1PQ8IX06 675 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 PLEKHO2Q8TD55 490 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 SAAL1Q96ER3 474 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 BICD1Q96G01 975 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 CAPNS2Q96L46 248 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 DESI2Q9BSY9 194 aa21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 SUCLA2Q9P2R7 463 aaPredicted RBP21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 ZNF215Q9UL58 517 aaPredicted RBP21.33■■□□□ 1.01
RBFOX1-215ENST00000553186 EDN1P05305 212 aa21.33■■□□□ 1
RBFOX1-215ENST00000553186 KRT13P13646 458 aa21.33■■□□□ 1
RBFOX1-215ENST00000553186 PSMC4P43686 418 aa21.33■■□□□ 1
RBFOX1-215ENST00000553186 VAMP7P51809 220 aa21.33■■□□□ 1
RBFOX1-215ENST00000553186 LACTBP83111 547 aaPredicted RBP21.33■■□□□ 1
RBFOX1-215ENST00000553186 DEFB115Q30KQ5 88 aa21.33■■□□□ 1
RBFOX1-215ENST00000553186 GBP6Q6ZN66 633 aa21.33■■□□□ 1
RBFOX1-215ENST00000553186 POMGNT1Q8WZA1 660 aa21.33■■□□□ 1
RBFOX1-215ENST00000553186 PHLPP2Q6ZVD8 1323 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 ACTN1P12814 892 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 FCGRTP55899 365 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 CDK17Q00537 523 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 RRAGAQ7L523 313 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 LINC01465Q8N7H1 131 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 LENG1Q96BZ8 264 aaPredicted RBP21.32■■□□□ 1
RBFOX1-215ENST00000553186 CCDC113Q9H0I3 377 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 ADGRG1Q9Y653 693 aa21.32■■□□□ 1
RBFOX1-215ENST00000553186 LRRC53A6NM62 1247 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 CCP110O43303 1012 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 GJB1P08034 283 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 KLRC1P26715 233 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 LIG4P49917 911 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 CLCN3P51790 818 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 EFNA5P52803 228 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 POLR2FP61218 127 aaKnown RBP21.31■■□□□ 1
RBFOX1-215ENST00000553186 IGBP1P78318 339 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 KLHDC7AQ5VTJ3 777 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 PDXDC1Q6P996 788 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 TLK2Q86UE8 772 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 RNF149Q8NC42 400 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 SIX2Q9NPC8 291 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 CREBZFQ9NS37 354 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 GCNT4Q9P109 453 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 COL1A2P08123 1366 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 SRGAP2CP0DJJ0 459 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 CACNA2D4Q7Z3S7 1137 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 RHPN2Q8IUC4 686 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 METTL13Q8N6R0 699 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 NLRC4Q9NPP4 1024 aa21.31■■□□□ 1
RBFOX1-215ENST00000553186 ZNHIT6Q9NWK9 470 aaKnown RBP21.31■■□□□ 1
RBFOX1-215ENST00000553186 ZSCAN12O43309 604 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 PPP3CAQ08209 521 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.3■■□□□ 1
RBFOX1-215ENST00000553186 TARS2Q9BW92 718 aaKnown RBP21.3■■□□□ 1
RBFOX1-215ENST00000553186 HAPLN2Q9GZV7 340 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 MAGEB2O15479 319 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 MSCO60682 206 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 UCHL3P15374 230 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 DNTTIP2Q5QJE6 756 aaKnown RBP21.3■■□□□ 1
RBFOX1-215ENST00000553186 TRIM65Q6PJ69 517 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 GPD1LQ8N335 351 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 MFSD14AQ96MC6 490 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 FBXL5Q9UKA1 691 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 GABRQQ9UN88 632 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 SIP14410 1827 aa21.3■■□□□ 1
RBFOX1-215ENST00000553186 TTLL13PA6NNM8 815 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 CCDC175P0C221 793 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 IRX5P78411 483 aaPredicted RBP21.29■■□□□ 1
RBFOX1-215ENST00000553186 CAP1Q01518 475 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 MARCH8Q5T0T0 291 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 PARD3BQ8TEW8 1205 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 ZBTB45Q96K62 511 aaPredicted RBP21.29■■□□□ 1
RBFOX1-215ENST00000553186 Q9Y3F1 56 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 EPN1Q9Y6I3 576 aaPredicted RBP21.29■■□□□ 1
RBFOX1-215ENST00000553186 CENPFP49454 3210 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 F2P00734 622 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 PTPN14Q15678 1187 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 REM2Q8IYK8 340 aaPredicted RBP21.29■■□□□ 1
RBFOX1-215ENST00000553186 SYN2Q92777 582 aaPredicted RBP21.29■■□□□ 1
RBFOX1-215ENST00000553186 KAT2BQ92831 832 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 ARHGAP20Q9P2F6 1191 aa21.29■■□□□ 1
RBFOX1-215ENST00000553186 ASAP2O43150 1006 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 NDUFA10O95299 355 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 TNNT1P13805 278 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 MYL7Q01449 175 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 PPFIA1Q13136 1202 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 GRIK4Q16099 956 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 SLFN12LQ6IEE8 588 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 MTHFD1LQ6UB35 978 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 ZPBP2Q6X784 338 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 TRPV1Q8NER1 839 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 LMO3Q8TAP4 145 aa21.28■■□□□ 1
RBFOX1-215ENST00000553186 FAM213AQ9BRX8 229 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms