RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 BCAR1P56945 870 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 KCNC3Q14003 757 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 CBX2Q14781 532 aaPredicted RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 TMC5Q6UXY8 1006 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 SPATA31D4Q6ZUB0 917 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 ZNF280BQ86YH2 543 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 REXO1Q8N1G1 1221 aaKnown RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 LINC01465Q8N7H1 131 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 KREMEN2Q8NCW0 462 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 MRPS27Q92552 414 aaKnown RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 ZNF558Q96NG5 402 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 FDXACB1Q9BRP7 624 aaPredicted RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 DISC1Q9NRI5 854 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 RBM28Q9NW13 759 aaKnown RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 TMEM161AQ9NX61 479 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 WRAP73Q9P2S5 460 aaPredicted RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 CACNG4Q9UBN1 327 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 TCEAL9Q9UHQ7 104 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 KCNJ14Q9UNX9 436 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 PCDHA10Q9Y5I2 948 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 DMXL1Q9Y485 3027 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 MYH9P35579 1960 aaKnown RBP7.71□□□□□ -1.17
PRPF40B-214ENST00000551320 EML1O00423 815 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 C2CD2LO14523 706 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 PI15O43692 258 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 CYP3A4P08684 503 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 DARSP14868 501 aaKnown RBP7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 ZSCAN20P17040 1043 aaPredicted RBP7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 AVPR2P30518 371 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 GGCXP38435 758 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 GPC3P51654 580 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 AP3B2Q13367 1082 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 NTRK3Q16288 839 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 PTPN21Q16825 1174 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 TAS1R1Q7RTX1 841 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 SUGP1Q8IWZ8 645 aaKnown RBP7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 ABI1Q8IZP0 508 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 VPS52Q8N1B4 723 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 SLC39A11Q8N1S5 342 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 TMEM105Q8N8V8 129 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 TBCKQ8TEA7 893 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 RSAD2Q8WXG1 361 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 ATOH1Q92858 354 aaPredicted RBP7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 PPP2R3CQ969Q6 453 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 TMEM143Q96AN5 459 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 B3GALT6Q96L58 329 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 NLRP4Q96MN2 994 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 ZMYND12Q9H0C1 365 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 TMEM117Q9H0C3 514 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 ADAM7Q9H2U9 754 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 MINDY3Q9H8M7 445 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 C1orf112Q9NSG2 853 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 SPG21Q9NZD8 308 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 HCFC2Q9Y5Z7 792 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 SQORQ9Y6N5 450 aa7.71□□□□□ -1.18
PRPF40B-214ENST00000551320 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 PRPF3O43395 683 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 NARSO43776 548 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 SLC37A4O43826 429 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 GAS7O60861 476 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 CDC45O75419 566 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 DDHD2O94830 711 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 POMCP01189 267 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 SRGAP2CP0DJJ0 459 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 LAG3P18627 525 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 EIF4BP23588 611 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 PDIA3P30101 505 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 SLC11A1P49279 550 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 NLRP5P59047 1200 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 SIGLEC14Q08ET2 396 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 TBC1D8BQ0IIM8 1120 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 NAALADL2Q58DX5 795 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 BMP2KLQ5H9B9 411 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 RNF20Q5VTR2 975 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 LRCH2Q5VUJ6 765 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 ZNF746Q6NUN9 644 aaPredicted RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 NIPA1Q7RTP0 329 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 ASCL5Q7RTU5 278 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 MIER3Q7Z3K6 550 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 ZNF598Q86UK7 904 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 CDR2LQ86X02 465 aaPredicted RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 RHPN2Q8IUC4 686 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 GLYCTKQ8IVS8 523 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 MRPL43Q8N983 215 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 CEP89Q96ST8 783 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 MAP7D2Q96T17 732 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 MTA3Q9BTC8 594 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 NRDE2Q9H7Z3 1164 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 C6orf50Q9HD87 102 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 SUCLA2Q9P2R7 463 aaPredicted RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 PIN4Q9Y237 131 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 USP20Q9Y2K6 914 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 HES2Q9Y543 173 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 EP300Q09472 2414 aaPredicted RBP7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 COL1A2P08123 1366 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 WDR81Q562E7 1941 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms