RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 MTMR9Q96QG7 549 aa6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 GZF1Q9H116 711 aaPredicted RBP6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 NKX2-4Q9H2Z4 354 aa6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 EHMT1Q9H9B1 1298 aa6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 DACT1Q9NYF0 836 aa6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 CYP39A1Q9NYL5 469 aa6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 HPSEQ9Y251 543 aa6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 PCDHA11Q9Y5I1 949 aa6.92□□□□□ -1.3
DEPDC4-209ENST00000550587 DNAH12Q6ZR08 3092 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 VWA3AA6NCI4 1184 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 NFIBO00712 420 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 TBX3O15119 743 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 CTAGE5O15320 804 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 B4GALT4O60513 344 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 KINO60870 393 aaKnown RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 DKK1O94907 266 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 ZNF202O95125 648 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 MYL3P08590 195 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 OR52Z1P0C646 297 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 PFKFB1P16118 471 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 RFC2P35250 354 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 SYKP43405 635 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 NDUFA8P51970 172 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 RPS6P62753 249 aaKnown RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 GRIN1Q05586 938 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 BFSP2Q13515 415 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 IL17AQ16552 155 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 CALCRLQ16602 461 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 ZSCAN23Q3MJ62 389 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 Q4G0T1 1027 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 DUSP28Q4G0W2 176 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 RASIP1Q5U651 963 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 C20orf204Q6ZNR8 217 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 RNF207Q6ZRF8 634 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 C16orf59Q7L2K0 433 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 ELOA2Q8IYF1 753 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 SIX5Q8N196 739 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 SLC43A3Q8NBI5 491 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 SYTL5Q8TDW5 730 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 AK8Q96MA6 479 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 FAM20AQ96MK3 541 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 UHRF1Q96T88 793 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 C1QTNF1Q9BXJ1 281 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 WDR11Q9BZH6 1224 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 CSRNP2Q9H175 543 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 TMEM60Q9H2L4 133 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 GOLPH3LQ9H4A5 285 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 CLSTN2Q9H4D0 955 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 KCNMB3Q9NPA1 279 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 FAM13BQ9NYF5 915 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 DDX25Q9UHL0 483 aaKnown RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 KCNH3Q9ULD8 1083 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 GNEQ9Y223 722 aaKnown RBP6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 MRVI1Q9Y6F6 885 aa6.91□□□□□ -1.3
DEPDC4-209ENST00000550587 SPTBN5Q9NRC6 3674 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 MEIS1O00470 390 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 ADCY6O43306 1168 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 SLC37A4O43826 429 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 PARNO95453 639 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 TDP2O95551 362 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 ZNF76P36508 570 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 TXKP42681 527 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 KCNJ6P48051 423 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 ZNF445P59923 1031 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 PTPN11Q06124 597 aaPredicted RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 TBC1D8BQ0IIM8 1120 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 BAATQ14032 418 aaPredicted RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 CEP55Q53EZ4 464 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 SPECC1Q5M775 1068 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 PCNX4Q63HM2 1172 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 XRRA1Q6P2D8 792 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 RBM43Q6ZSC3 357 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 NIPA1Q7RTP0 329 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 DEFB128Q7Z7B8 93 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 FBXO16Q8IX29 292 aaPredicted RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 ALDH16A1Q8IZ83 802 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 IGSF22Q8N9C0 903 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 DNERQ8NFT8 737 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 OR6J1Q8NGC5 347 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 PHOSPHO2Q8TCD6 241 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 NSUN6Q8TEA1 469 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 SCFD2Q8WU76 684 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 HAS1Q92839 578 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 EPSTI1Q96J88 318 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 TAAR1Q96RJ0 339 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 RMDN3Q96TC7 470 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 SDF4Q9BRK5 362 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 PYM1Q9BRP8 204 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 MTG1Q9BT17 334 aaPredicted RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 NOC4LQ9BVI4 516 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 RAB34Q9BZG1 259 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 CCSER1Q9C0I3 900 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 TRPV6Q9H1D0 765 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 NUP62CLQ9H1M0 184 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 COL20A1Q9P218 1284 aa6.9□□□□□ -1.3
DEPDC4-209ENST00000550587 USP25Q9UHP3 1055 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms