RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 EEF2KMTQ96G04 330 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 NTPCRQ9BSD7 190 aaKnown RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 SRRTQ9BXP5 876 aaKnown RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 THAP9Q9H5L6 903 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 XPNPEP3Q9NQH7 507 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 KMT5AQ9NQR1 393 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 TYW1Q9NV66 732 aaKnown RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 INTS13Q9NVM9 706 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 DDX20Q9UHI6 824 aaKnown RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 PDE4DIPQ5VU43 2346 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 LRRIQ4A6NIV6 560 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 CCDC169A6NNP5 214 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 KCNJ18B7U540 433 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 TISP43B9A030 160 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 PDXKO00764 312 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 GFRA3O60609 400 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 EDN1P05305 212 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 HOXC8P31273 242 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 LAMTOR4Q0VGL1 99 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 ALCAMQ13740 583 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 KCNJ12Q14500 433 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 EDRF1Q3B7T1 1238 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 GNASQ5JWF2 1037 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 IER5Q5VY09 327 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 EFCAB12Q6NXP0 572 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 SLC39A4Q6P5W5 647 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 MTHFD1LQ6UB35 978 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 CXCL17Q6UXB2 119 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 MAP4K3Q8IVH8 894 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 NOC3LQ8WTT2 800 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 TCP11Q8WWU5 503 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 PRPF31Q8WWY3 499 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 PSPC1Q8WXF1 523 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 HVCN1Q96D96 273 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 IFT74Q96LB3 600 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 TSG101Q99816 390 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 JPH2Q9BR39 696 aaPredicted RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 TRIM5Q9C035 493 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 XPO4Q9C0E2 1151 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 SUGCTQ9HAC7 445 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 SETD4Q9NVD3 440 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 IFNKQ9P0W0 207 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 SUCLA2Q9P2R7 463 aaPredicted RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 LIMA1Q9UHB6 759 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 TBX20Q9UMR3 447 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 PTPN22Q9Y2R2 807 aa8.89□□□□□ -0.99
DEPDC4-207ENST00000549249 ANK1P16157 1881 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 DENND3A2RUS2 1198 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 MBLAC1A4D2B0 266 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 RRN3P2A6NIE6 340 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 ANKRD63C9JTQ0 380 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 CLIC2O15247 247 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 MAGEB2O15479 319 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 KPNA6O60684 536 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 NR3C1P04150 777 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 CASP4P49662 377 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 SMTNP53814 917 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 CHMP4BP1P59074 171 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 ZNF200P98182 395 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 FKBP3Q00688 224 aaKnown RBP8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 PPP2R5AQ15172 486 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 KRT31Q15323 416 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 KCNA10Q16322 511 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 NFIL3Q16649 462 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 BRDTQ58F21 947 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 TCP11X2Q5H9J9 407 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 CDCA2Q69YH5 1023 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 RUFY4Q6ZNE9 571 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 STXBP4Q6ZWJ1 553 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 EXOC8Q8IYI6 725 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 METTL13Q8N6R0 699 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 SLC17A8Q8NDX2 589 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 DEPTORQ8TB45 409 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 ZNF668Q96K58 619 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 CEP63Q96MT8 703 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 ACCSQ96QU6 501 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 PPP1R9BQ96SB3 815 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 MTG1Q9BT17 334 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 KATNAL1Q9BW62 490 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 CCDC113Q9H0I3 377 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 GBP3Q9H0R5 595 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 SPC25Q9HBM1 224 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 AGPAT3Q9NRZ7 376 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 DMAC2Q9NW81 257 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 TAB2Q9NYJ8 693 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 HDAC6Q9UBN7 1215 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 USP20Q9Y2K6 914 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 HTTP42858 3142 aa8.88□□□□□ -0.99
DEPDC4-207ENST00000549249 GRIN2DO15399 1336 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 PHLPP2Q6ZVD8 1323 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 NRCAMQ92823 1304 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 A0A1B0GTH6 734 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 LRRC10BA6NIK2 292 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 RBAK-RBAKDNI3L0D1 243 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 TEX33O43247 280 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms