RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PHF20L1A8MW92 1017 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 QARSP47897 775 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 ACOT2P49753 483 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 BAATQ14032 418 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 TMEM132AQ24JP5 1023 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 UBAP2Q5T6F2 1119 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 DPH6Q7L8W6 267 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 LRRC57Q8N9N7 239 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 CPA5Q8WXQ8 436 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 LRRC45Q96CN5 670 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 TRIM7Q9C029 511 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 OLFML3Q9NRN5 406 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 GABBR1Q9UBS5 961 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 RNF14Q9UBS8 474 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 ANKRD63C9JTQ0 380 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 ZBTB7AO95365 584 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 CCDC172P0C7W6 258 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 GLE1Q53GS7 698 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 KAZNQ674X7 775 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 SWSAP1Q6NVH7 229 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 FBXO25Q8TCJ0 367 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 ASIC3Q9UHC3 531 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 TBK1Q9UHD2 729 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 HERC5Q9UII4 1024 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 PNMA2Q9UL42 364 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 MYH4Q9Y623 1939 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 GOLGA6L7A0A1B0GV03 622 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 GJB6O95452 261 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 P4HBP07237 508 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 DPEP1P16444 411 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 CIITAP33076 1130 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 CAP2P40123 477 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 RARRES1P49788 294 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 LRRC14Q15048 493 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 SPOPLQ6IQ16 392 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 DLK2Q6UY11 383 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 WHAMMQ8TF30 809 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 DYDC1Q8WWB3 177 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 CRYGNQ8WXF5 182 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 TATDN2Q93075 761 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 ACCSQ96QU6 501 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 NUP85Q9BW27 656 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 KMT5AQ9NQR1 393 aa14.74□□□□□ -0.05
PRPF40B-209ENST00000548825 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 SHBGP04278 402 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 MARSP56192 900 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 TKFCQ3LXA3 575 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 SEL1L2Q5TEA6 688 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 PRUNE1Q86TP1 453 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 NLRX1Q86UT6 975 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 IQCKQ8N0W5 287 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 TAS1R2Q8TE23 839 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 FAM151AQ8WW52 585 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 SPIRE2Q8WWL2 714 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 JDP2Q8WYK2 163 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 ATG4CQ96DT6 458 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 PPP1R16BQ96T49 567 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 GSTTP1A0A1W2PQM5 241 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 CLDN3O15551 220 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 ASNSP08243 561 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 MOXD1Q6UVY6 613 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 PACS2Q86VP3 889 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 SLC5A5Q92911 643 aa14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 PAIP2Q9BPZ3 127 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-209ENST00000548825 LRRIQ4A6NIV6 560 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 WNT10BO00744 389 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 SLC16A3O15427 465 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 ADRB2P07550 413 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 VIL1P09327 827 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 SNRNP35Q16560 246 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 DCAF12L1Q5VU92 463 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 ANKRD42Q8N9B4 389 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 TMEM143Q96AN5 459 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 PWWP2AQ96N64 755 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 ISCUQ9H1K1 167 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 RIPK3Q9Y572 518 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 MYO1FO00160 1098 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 GUCY2CP25092 1073 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 MNAT1P51948 309 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 HMGCS2P54868 508 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 OSTNP61366 133 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 DMP1Q13316 513 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 UAP1Q16222 522 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 UBL4BQ8N7F7 174 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 PIK3R5Q8WYR1 880 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 HAUS1Q96CS2 278 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 THOC1Q96FV9 657 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 MBOAT7Q96N66 472 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 RPAP3Q9H6T3 665 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 STK32BQ9NY57 414 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 CD2APQ9Y5K6 639 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 VIMP08670 466 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 SMTNP53814 917 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 MRPS9P82933 396 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 NOP9Q86U38 636 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 CDR2LQ86X02 465 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 PRPF38AQ8NAV1 312 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 PLEKHO2Q8TD55 490 aa14.72□□□□□ -0.05
PRPF40B-209ENST00000548825 SEMA4DQ92854 862 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms