RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PYROXD1Q8WU10 500 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 PRMT1Q99873 361 aaKnown RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 PABPC3Q9H361 631 aaKnown RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 TBC1D22BQ9NU19 505 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 HAUS2Q9NVX0 235 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 DBR1Q9UK59 544 aaKnown RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 DENND3A2RUS2 1198 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RSPH10B2B2RC85 870 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 GOLGA8SH3BPF8 625 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 TJP3O95049 919 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 MT-ND3P03897 115 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 ASNSP08243 561 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RSPH10BP0C881 870 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 HNRNPH3P31942 346 aaKnown RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 DYNLT1P63172 113 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 GIT2Q14161 759 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RINT1Q6NUQ1 792 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 KCNK18Q7Z418 384 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RPAINQ86UA6 219 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 ZBTB8OSQ8IWT0 167 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 PDIK1LQ8N165 341 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 KCTD17Q8N5Z5 321 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 FBXL13Q8NEE6 735 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RNF25Q96BH1 459 aaPredicted RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 SAAL1Q96ER3 474 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 MASTLQ96GX5 879 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 SH2D3AQ9BRG2 576 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 SCINQ9Y6U3 715 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 TCP11X1B4DZS4 312 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 H7C0C1 242 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 EIF3DO15371 548 aaKnown RBP eCLIP8.77□□□□□ -1
PRKAB1-207ENST00000542698 RAD17O75943 681 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 TNNC2P02585 160 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 COMTP21964 271 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 COPB2P35606 906 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 HSPA9P38646 679 aaKnown RBP8.77□□□□□ -1
PRKAB1-207ENST00000542698 ATP5OP48047 213 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 EVX2Q03828 476 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 KRT17Q04695 432 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 MYO1EQ12965 1108 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 BBS9Q3SYG4 887 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 DNAAF5Q86Y56 855 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 C4orf32Q8N8J7 132 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 CRAMP1Q96RY5 1269 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 C11orf70Q9BRQ4 267 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 ETNK1Q9HBU6 452 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 NRBP2Q9NSY0 501 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 GJA3Q9Y6H8 435 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 NFAT5O94916 1531 aa8.77□□□□□ -1
PRKAB1-207ENST00000542698 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CNTNAP4Q9C0A0 1308 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 DCCP43146 1447 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 WDR64B1ANS9 1081 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MMP10P09238 476 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 FGRP09769 529 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 NR1H3Q13133 447 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 TAF11Q15544 211 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MTERF2Q49AM1 385 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 HHIPL2Q6UWX4 724 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 APTXQ7Z2E3 356 aaKnown RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 ATL2Q8NHH9 583 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CFAP61Q8NHU2 1237 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 SGSM3Q96HU1 749 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 LRRC37BQ96QE4 947 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MTMR9Q96QG7 549 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 TGS1Q96RS0 853 aaKnown RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 RMDN3Q96TC7 470 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 THAP2Q9H0W7 228 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 UVRAGQ9P2Y5 699 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 TTC7AQ9ULT0 858 aaPredicted RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 GINS2Q9Y248 185 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 FAM208AQ9UK61 1670 aaKnown RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CCT8L1PA6NM43 557 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 FOXN3O00409 490 aaPredicted RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 P4HA1P13674 534 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 ABCD1P33897 745 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 BASP1P80723 227 aaKnown RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC20A2Q08357 652 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MAPK7Q13164 816 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 KRT81Q14533 505 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 TRMT10CQ7L0Y3 403 aaKnown RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MAP7D3Q8IWC1 876 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC30A5Q8TAD4 765 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 SNF8Q96H20 258 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CDHR1Q96JP9 859 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 FAM213AQ9BRX8 229 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 POLR3CQ9BUI4 534 aaPredicted RBP8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 OSGEPQ9NPF4 335 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 KCND2Q9NZV8 630 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 GGT7Q9UJ14 662 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 PRR12Q9ULL5 1215 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CLDN3O15551 220 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 DCTN3O75935 186 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 ATP5HO75947 161 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 CD58P19256 250 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 ITIH2P19823 946 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 BSPRYQ5W0U4 402 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 MOXD1Q6UVY6 613 aa8.77□□□□□ -1.01
PRKAB1-207ENST00000542698 PASD1Q8IV76 773 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms