RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 LAMP2P13473 410 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 HOXA9P31269 272 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 RPS9P46781 194 aaKnown RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 GLUD2P49448 558 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 ATXN1P54253 815 aaKnown RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 NRLP54845 237 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 ANTXR2P58335 489 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 NUCB1Q02818 461 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 DMWDQ09019 674 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 HTR4Q13639 388 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 MLF2Q15773 248 aaPredicted RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 SWSAP1Q6NVH7 229 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 SGMS1Q86VZ5 419 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 GPR152Q8TDT2 470 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 RIN2Q8WYP3 895 aaPredicted RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 SMG7Q92540 1137 aaKnown RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 NELL1Q92832 810 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 CCDC51Q96ER9 411 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 ZNF577Q9BSK1 485 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 NRDE2Q9H7Z3 1164 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 PIDD1Q9HB75 910 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 RXFP1Q9HBX9 757 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 PRMT8Q9NR22 394 aaPredicted RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 FAM105AQ9NUU6 356 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 BARHL2Q9NY43 387 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 PIN4Q9Y237 131 aaKnown RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 MRPS17Q9Y2R5 130 aaKnown RBP6.32□□□□□ -1.4
CTSB-216ENST00000530290 GREB1Q4ZG55 1949 aa6.32□□□□□ -1.4
CTSB-216ENST00000530290 CEP295Q9C0D2 2601 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 CNTNAP5Q8WYK1 1306 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 ASPMQ8IZT6 3477 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 IGLV3-22A0A075B6J6 115 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 NT5C1B-RDH14C9J2C7 533 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 DDX39AO00148 427 aaKnown RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 SLC30A4O14863 429 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 DHX15O43143 795 aaKnown RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 PRC1O43663 620 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 GAS2O43903 313 aaKnown RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 DKC1O60832 514 aaKnown RBP eCLIP6.31□□□□□ -1.4
CTSB-216ENST00000530290 DCNP07585 359 aaKnown RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 HNRNPA1P09651 372 aaKnown RBP eCLIP6.31□□□□□ -1.4
CTSB-216ENST00000530290 ATP4AP20648 1035 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 CIITAP33076 1130 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 SLC11A1P49279 550 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 PRKCEQ02156 737 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 DSG1Q02413 1049 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 SPECC1Q5M775 1068 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 WWC2Q6AWC2 1192 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 LAIR1Q6GTX8 287 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 PDXDC1Q6P996 788 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 MAMSTRQ6ZN01 415 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 TMEM173Q86WV6 379 aaPredicted RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 HACE1Q8IYU2 909 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 RNF168Q8IYW5 571 aaPredicted RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 FANCBQ8NB91 859 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 BICD2Q8TD16 824 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 CRYGNQ8WXF5 182 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 AUTS2Q8WXX7 1259 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 PPP1R16BQ96T49 567 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 RIT2Q99578 217 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 C22orf23Q9BZE7 217 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 PRKD2Q9BZL6 878 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 RSAD1Q9HA92 442 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 SENP2Q9HC62 589 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 AGPAT5Q9NUQ2 364 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 SPATA6Q9NWH7 488 aaPredicted RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 FNIP2Q9P278 1114 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 GABBR1Q9UBS5 961 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 USP18Q9UMW8 372 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 INPP5FQ9Y2H2 1132 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 FAN1Q9Y2M0 1017 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 SAMM50Q9Y512 469 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 SDK1Q7Z5N4 2213 aa6.31□□□□□ -1.4
CTSB-216ENST00000530290 SETXQ7Z333 2677 aaKnown RBP6.31□□□□□ -1.4
CTSB-216ENST00000530290 IGKV6-21A0A0C4DH24 114 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 FAM86B1E9PN63 330 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 RBAK-RBAKDNI3L0D1 243 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 TEX28O15482 410 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 N4BP1O75113 896 aaKnown RBP6.3□□□□□ -1.4
CTSB-216ENST00000530290 XYLBO75191 536 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 OFD1O75665 1012 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 FAM86B2P0C5J1 330 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 GNA11P29992 359 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 AXLP30530 894 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 AK2P54819 239 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 SHC2P98077 582 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 TARBP2Q15633 366 aaKnown RBP6.3□□□□□ -1.4
CTSB-216ENST00000530290 XKR3Q5GH77 459 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 ZBTB41Q5SVQ8 909 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 LIN9Q5TKA1 542 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 C1orf228Q6PIY5 440 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 GET4Q7L5D6 327 aaPredicted RBP6.3□□□□□ -1.4
CTSB-216ENST00000530290 CATSPER4Q7RTX7 472 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 SRGAP1Q7Z6B7 1085 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 MRPL10Q7Z7H8 261 aaKnown RBP6.3□□□□□ -1.4
CTSB-216ENST00000530290 MICU3Q86XE3 530 aa6.3□□□□□ -1.4
CTSB-216ENST00000530290 REXO1Q8N1G1 1221 aaKnown RBP6.3□□□□□ -1.4
CTSB-216ENST00000530290 LRRC71Q8N4P6 559 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms