RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TLR3O15455 904 aaKnown RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 RNF113AO15541 343 aaKnown RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 STRNO43815 780 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 CBFA2T3O75081 653 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 DDHD2O94830 711 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 RASGRP1O95267 797 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 ZNF3P17036 446 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 MCAMP43121 646 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 HAAOP46952 286 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 ETV1P50549 477 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 NLRP5P59047 1200 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 DAB2P98082 770 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 CD83Q01151 205 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 PLCB4Q15147 1175 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 OASLQ15646 514 aaKnown RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 CRY1Q16526 586 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 NDUFA5Q16718 116 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 INSCQ1MX18 579 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 KMT5BQ4FZB7 885 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 PPP1R18Q6NYC8 613 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 CEP85Q6P2H3 762 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 MZT2AQ6P582 158 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 ZNF600Q6ZNG1 722 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 CCDC121Q6ZUS5 278 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 MIGA2Q7L4E1 593 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 TAOK1Q7L7X3 1001 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 SESTD1Q86VW0 696 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 ANKRD42Q8N9B4 389 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 GOLM1Q8NBJ4 401 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 TOR1AIP2Q8NFQ8 470 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 CD99L2Q8TCZ2 262 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 SCG3Q8WXD2 468 aaKnown RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 STMN4Q9H169 189 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 PI4KBQ9UBF8 816 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 PFDN2Q9UHV9 154 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 MAGED1Q9Y5V3 778 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 MYH8P13535 1937 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 LRRIQ3A6PVS8 624 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 NDUFB5O43674 189 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 EXTL3O43909 919 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 RHOBTB3O94955 611 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 HLA-DOAP06340 250 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 P4HA1P13674 534 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 H2AFXP16104 143 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 ZKSCAN1P17029 563 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 PTPRAP18433 802 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CNGA1P29973 690 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 RPL9P32969 192 aaKnown RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 MLH1P40692 756 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CETN2P41208 172 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 STT3AP46977 705 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 GPC3P51654 580 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 MRPS15P82914 257 aaKnown RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 LACTBP83111 547 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 FOXK1P85037 733 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 PDE1BQ01064 536 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 EXOSC10Q01780 885 aaKnown RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 ATP2B2Q01814 1243 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 TMEM62Q0P6H9 643 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 MAP3K12Q12852 859 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 PICALMQ13492 652 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 ITGA7Q13683 1181 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 SNCBQ16143 134 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 MTERF2Q49AM1 385 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 SLC9C1Q4G0N8 1177 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CEP78Q5JTW2 689 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 ANO1Q5XXA6 986 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 IKBIPQ70UQ0 350 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 PRRT2Q7Z6L0 340 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CKAP2LQ8IYA6 745 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 SYCP3Q8IZU3 236 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 EXOC6Q8TAG9 804 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 DYDC1Q8WWB3 177 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 IFT81Q8WYA0 676 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 INTS12Q96CB8 462 aaKnown RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 TRMT2BQ96GJ1 504 aaKnown RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 ARL5BQ96KC2 179 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 ANKRD27Q96NW4 1050 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CATSPER2Q96P56 530 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 TSC22D3Q99576 134 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 TMEM106CQ9BVX2 250 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 VPS16Q9H269 839 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CENPHQ9H3R5 247 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 PSTPIP2Q9H939 334 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 VPS37BQ9H9H4 285 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CYP4F12Q9HCS2 524 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 ATP8A2Q9NTI2 1148 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 NDFIP2Q9NV92 336 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 MBD2Q9UBB5 411 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 AGTPBP1Q9UPW5 1226 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 EFR3BQ9Y2G0 817 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 FHOD1Q9Y613 1164 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.12□□□□□ -1.11
HDAC3-216ENST00000523088 HTTP42858 3142 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 CENPFP49454 3210 aa8.12□□□□□ -1.11
HDAC3-216ENST00000523088 NAV1Q8NEY1 1877 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 ELP1O95163 1332 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms