RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ERLIN2O94905 339 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 XRCC6P12956 609 aaKnown RBP eCLIP22.24■■□□□ 1.154e-17■□□□□ 10.6
UBE2D3-220ENST00000505307 HOXA11P31270 313 aaPredicted RBP22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 ITIH3Q06033 890 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 SAFBQ15424 915 aaKnown RBP eCLIP22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 LLGL2Q6P1M3 1020 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 AGMOQ6ZNB7 445 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 RPGRIP1Q96KN7 1286 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 CCDC43Q96MW1 224 aaKnown RBP22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 ZBP1Q9H171 429 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 RSAD1Q9HA92 442 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 HCFC2Q9Y5Z7 792 aa22.24■■□□□ 1.15
UBE2D3-220ENST00000505307 ZBTB39O15060 712 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 CLASP2O75122 1294 aaKnown RBP22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 CTSAP10619 480 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 NCLP19338 710 aaKnown RBP22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 TXKP42681 527 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 PTENP60484 403 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 LONRF3Q496Y0 759 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 CES5AQ6NT32 575 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 IFNLR1Q8IU57 520 aaPredicted RBP22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 NECTIN4Q96NY8 510 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 MTMR9Q96QG7 549 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 TMEM175Q9BSA9 504 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 XPNPEP1Q9NQW7 623 aa22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 BMP2KQ9NSY1 1161 aaPredicted RBP22.23■■□□□ 1.15
UBE2D3-220ENST00000505307 MEIS3P2A8K0S8 358 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 JAK2O60674 1132 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 ALDH2P05091 517 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 CA8P35219 290 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 UBXN11Q5T124 520 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 BMP8AQ7Z5Y6 402 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 FAM193BQ96PV7 902 aaPredicted RBP22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 NFKBIZQ9BYH8 718 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 ADAM7Q9H2U9 754 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 DZANK1Q9NVP4 752 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 LIMCH1Q9UPQ0 1083 aa22.22■■□□□ 1.15
UBE2D3-220ENST00000505307 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 ZXDAP98168 799 aa22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 NOTUMQ6P988 496 aa22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 HFE2Q6ZVN8 426 aa22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 PPFIBP1Q86W92 1011 aa22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 TMEM173Q86WV6 379 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 GBP3Q9H0R5 595 aa22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 NR2E1Q9Y466 385 aa22.21■■□□□ 1.15
UBE2D3-220ENST00000505307 ITGA4P13612 1032 aa22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 ARL2P36404 184 aa22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 SLC11A1P49279 550 aa22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 RARRES1P49788 294 aa22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 ORC2Q13416 577 aaPredicted RBP22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 TRIM67Q6ZTA4 783 aa22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 LLPHQ9BRT6 129 aaKnown RBP22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 DNAJB4Q9UDY4 337 aa22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 FAN1Q9Y2M0 1017 aa22.2■■□□□ 1.14
UBE2D3-220ENST00000505307 INO80B-WBP1J3KQ70 363 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 INPPL1O15357 1258 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 TSPAN1O60635 241 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 HOXD11P31277 338 aaPredicted RBP22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 MTHFRP42898 656 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 ZNF280BQ86YH2 543 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 HACE1Q8IYU2 909 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 RIPOR3Q96MK2 946 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 CSRNP2Q9H175 543 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 TUFT1Q9NNX1 390 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 MUC6Q6W4X9 2439 aa22.19■■□□□ 1.14
UBE2D3-220ENST00000505307 DDHD2O94830 711 aa22.18■■□□□ 1.14
UBE2D3-220ENST00000505307 SMG8Q8ND04 991 aaKnown RBP22.18■■□□□ 1.14
UBE2D3-220ENST00000505307 BCL7CQ8WUZ0 217 aaPredicted RBP22.18■■□□□ 1.14
UBE2D3-220ENST00000505307 C8orf76Q96K31 380 aa22.18■■□□□ 1.14
UBE2D3-220ENST00000505307 APOL5Q9BWW9 433 aa22.18■■□□□ 1.14
UBE2D3-220ENST00000505307 EMILIN2Q9BXX0 1053 aa22.18■■□□□ 1.14
UBE2D3-220ENST00000505307 IPPQ9Y573 584 aa22.18■■□□□ 1.14
UBE2D3-220ENST00000505307 ARID2Q68CP9 1835 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 TECTAO75443 2155 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 TMEM221A6NGB7 291 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 M0R296 226 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 WNT7AO00755 349 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 MCM7P33993 719 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 FOSBP53539 338 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 HMGN5P82970 282 aaKnown RBP22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 MBTD1Q05BQ5 628 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 ST3GAL1Q11201 340 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 CAPSQ13938 189 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 PTPN14Q15678 1187 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 MCPH1Q8NEM0 835 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 ASAP3Q8TDY4 903 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 PIGOQ8TEQ8 1089 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 ZSCAN31Q96LW9 406 aaPredicted RBP22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 NACC1Q96RE7 527 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 FOXP1Q9H334 677 aaPredicted RBP22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 DBR1Q9UK59 544 aaKnown RBP22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 SSX2IPQ9Y2D8 614 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 GIT1Q9Y2X7 761 aa22.17■■□□□ 1.14
UBE2D3-220ENST00000505307 NR1I2O75469 434 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 SEC24BO95487 1268 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 POMCP01189 267 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 GLRA2P23416 452 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 SIGLEC14Q08ET2 396 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 PTPN21Q16825 1174 aa22.16■■□□□ 1.14
UBE2D3-220ENST00000505307 ATAT1Q5SQI0 421 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms