RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 TESPA1A2RU30 521 aaPredicted RBP16.02■□□□□ 0.16
CHTOP-206ENST00000495554 WDR64B1ANS9 1081 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 CEP104O60308 925 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 USP2O75604 605 aaPredicted RBP16.02■□□□□ 0.16
CHTOP-206ENST00000495554 RGS20O76081 388 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 OAZ1P54368 228 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 KRT76Q01546 638 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 SATB1Q01826 763 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.16
CHTOP-206ENST00000495554 KIF22Q14807 665 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 ALS2CLQ60I27 953 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
CHTOP-206ENST00000495554 RIN2Q8WYP3 895 aaPredicted RBP16.02■□□□□ 0.16
CHTOP-206ENST00000495554 EMSYQ7Z589 1322 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 TMCO5BA8MYB1 307 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 ATP2A1O14983 1001 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 ACTN2P35609 894 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 HNRNPH2P55795 449 aaKnown RBP16.02■□□□□ 0.15
CHTOP-206ENST00000495554 DLG4P78352 724 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 NOL9Q5SY16 702 aaKnown RBP16.02■□□□□ 0.15
CHTOP-206ENST00000495554 XRRA1Q6P2D8 792 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 METTL13Q8N6R0 699 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.02■□□□□ 0.15
CHTOP-206ENST00000495554 SCFD2Q8WU76 684 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 CTNNBL1Q8WYA6 563 aaPredicted RBP16.02■□□□□ 0.15
CHTOP-206ENST00000495554 RFFLQ8WZ73 363 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 CBWD1Q9BRT8 395 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 ANKEF1Q9NU02 776 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 HSPBP1Q9NZL4 362 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 STXBP5LQ9Y2K9 1186 aa16.02■□□□□ 0.15
CHTOP-206ENST00000495554 NCANO14594 1321 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 TISP43B9A030 160 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 PGRMC1O00264 195 aaKnown RBP16.01■□□□□ 0.15
CHTOP-206ENST00000495554 BACH1O14867 736 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 ZBTB48P10074 688 aaPredicted RBP16.01■□□□□ 0.15
CHTOP-206ENST00000495554 TNFAIP3P21580 790 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 CARSP49589 748 aaKnown RBP16.01■□□□□ 0.15
CHTOP-206ENST00000495554 PRKG1Q13976 671 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 ZSCAN26Q16670 478 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 ARHGAP44Q17R89 818 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 NT5DC3Q86UY8 548 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.152e-9■■■■□ 19.3
CHTOP-206ENST00000495554 PPP2R3BQ9Y5P8 575 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 FOXN3O00409 490 aaPredicted RBP16.01■□□□□ 0.15
CHTOP-206ENST00000495554 NCKAP1LP55160 1127 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 LEKR1Q6ZMV7 388 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 RDM1Q8NG50 284 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 SLC35G2Q8TBE7 412 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 RNF217Q8TC41 542 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 NFU1Q9UMS0 254 aa16.01■□□□□ 0.15
CHTOP-206ENST00000495554 OPA1O60313 960 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 PEX3P56589 373 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 PPP3CAQ08209 521 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 XKR9Q5GH70 373 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 PPP1R3FQ6ZSY5 799 aaPredicted RBP16■□□□□ 0.15
CHTOP-206ENST00000495554 KLHL7Q8IXQ5 586 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 RASGEF1CQ8N431 466 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 IFT81Q8WYA0 676 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16■□□□□ 0.15
CHTOP-206ENST00000495554 HES6Q96HZ4 224 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 TELO2Q9Y4R8 837 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 SPDYE16A6NNV3 312 aaPredicted RBP16■□□□□ 0.15
CHTOP-206ENST00000495554 PMM2O15305 246 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 SLC16A4O15374 487 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 RAD51CO43502 376 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 HSF2BPO75031 334 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 EPC2Q52LR7 807 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 TRMT1LQ7Z2T5 733 aaKnown RBP16■□□□□ 0.15
CHTOP-206ENST00000495554 EIF1ADQ8N9N8 165 aaKnown RBP16■□□□□ 0.15
CHTOP-206ENST00000495554 GPRASP2Q96D09 838 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 SH3GL2Q99962 352 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 UBE2TQ9NPD8 197 aaPredicted RBP16■□□□□ 0.15
CHTOP-206ENST00000495554 A1CFQ9NQ94 594 aaKnown RBP16■□□□□ 0.15
CHTOP-206ENST00000495554 CYP39A1Q9NYL5 469 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 AMFRQ9UKV5 643 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 EXOC7Q9UPT5 735 aa16■□□□□ 0.15
CHTOP-206ENST00000495554 ESYT3A0FGR9 886 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 ANKRD62A6NC57 917 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 ZSCAN5CA6NGD5 496 aaPredicted RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 GOLGA8KD6RF30 607 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 CCDC188H7C350 402 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 LRRN2O75325 713 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 CCND2P30279 289 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 GCLMP48507 274 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 SMTNP53814 917 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 SUPT20HL1Q3ZLR7 823 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 SH3D19Q5HYK7 790 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 FAM102BQ5T8I3 360 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 TSEN2Q8NCE0 465 aaKnown RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 RUFY1Q96T51 708 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 AGPAT1Q99943 283 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 OSGEPQ9NPF4 335 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 GPRC5CQ9NQ84 441 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 GOLGA6CA6NDK9 693 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 BUB1BO60566 1050 aaPredicted RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 DDNO94850 711 aaPredicted RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 GOLGA6DP0CG33 693 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 KCNA2P16389 499 aa15.99■□□□□ 0.15
CHTOP-206ENST00000495554 MCCD1P59942 119 aaPredicted RBP15.99■□□□□ 0.15
CHTOP-206ENST00000495554 PPATQ06203 517 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms