RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PDE12Q6L8Q7 609 aaKnown RBP10.68□□□□□ -0.7
MSH5-218ENST00000494646 AGMOQ6ZNB7 445 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 MRPL10Q7Z7H8 261 aaKnown RBP10.68□□□□□ -0.7
MSH5-218ENST00000494646 CDR2LQ86X02 465 aaPredicted RBP10.68□□□□□ -0.7
MSH5-218ENST00000494646 CATSPER3Q86XQ3 398 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 ZNF280BQ86YH2 543 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 ADHFE1Q8IWW8 467 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 FBXO18Q8NFZ0 1043 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 VN1R2Q8NFZ6 395 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 ASAP3Q8TDY4 903 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 AUTS2Q8WXX7 1259 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 TRAIPQ9BWF2 469 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 MRPL9Q9BYD2 267 aaKnown RBP10.68□□□□□ -0.7
MSH5-218ENST00000494646 POLD4Q9HCU8 107 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 NGRNQ9NPE2 291 aaKnown RBP10.68□□□□□ -0.7
MSH5-218ENST00000494646 GPRC5CQ9NQ84 441 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 TBC1D13Q9NVG8 400 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 DNAJB4Q9UDY4 337 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 USO1O60763 962 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 DGAT1O75907 488 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 EYA4O95677 639 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 POMCP01189 267 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 XRCC6P12956 609 aaKnown RBP eCLIP10.67□□□□□ -0.7
MSH5-218ENST00000494646 ITGA4P13612 1032 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 GLRA2P23416 452 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 PPM1AP35813 382 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 RBM25P49756 843 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 PTENP60484 403 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 NCBP1Q09161 790 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 CAPSQ13938 189 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 TFDP1Q14186 410 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 MXD4Q14582 209 aaPredicted RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 TTC38Q5R3I4 469 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 GLB1LQ6UWU2 654 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 TMEM173Q86WV6 379 aaPredicted RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 SMG8Q8ND04 991 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 TMEM169Q96HH4 297 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 APOL6Q9BWW8 343 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 EIF2AQ9BY44 585 aaKnown RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 RNF39Q9H2S5 420 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 FOXP1Q9H334 677 aaPredicted RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 C11orf16Q9NQ32 467 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 SH2B1Q9NRF2 756 aaPredicted RBP10.67□□□□□ -0.7
MSH5-218ENST00000494646 MIOSQ9NXC5 875 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 HES2Q9Y543 173 aa10.67□□□□□ -0.7
MSH5-218ENST00000494646 C2orf71A6NGG8 1288 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 B4GALT3O60512 393 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 TSPAN1O60635 241 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 GPR37L1O60883 481 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 ERLIN2O94905 339 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 ALDH2P05091 517 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 OR52Z1P0C646 297 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 ALADP13716 330 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 SLC11A1P49279 550 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 RAB27AP51159 221 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 COASYQ13057 564 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 SMC1AQ14683 1233 aaKnown RBP10.66□□□□□ -0.7
MSH5-218ENST00000494646 ECM1Q16610 540 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 VPS52Q8N1B4 723 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 C4orf32Q8N8J7 132 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 URGCPQ8TCY9 931 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 BCL7CQ8WUZ0 217 aaPredicted RBP10.66□□□□□ -0.7
MSH5-218ENST00000494646 IGSF21Q96ID5 467 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 RPGRIP1Q96KN7 1286 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 FAM193BQ96PV7 902 aaPredicted RBP10.66□□□□□ -0.7
MSH5-218ENST00000494646 NACC1Q96RE7 527 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 CDCA3Q99618 268 aaPredicted RBP10.66□□□□□ -0.7
MSH5-218ENST00000494646 POLR3FQ9H1D9 316 aaPredicted RBP10.66□□□□□ -0.7
MSH5-218ENST00000494646 RSAD1Q9HA92 442 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 TUFT1Q9NNX1 390 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 FAN1Q9Y2M0 1017 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 USP15Q9Y4E8 981 aaPredicted RBP10.66□□□□□ -0.7
MSH5-218ENST00000494646 TRIP11Q15643 1979 aa10.66□□□□□ -0.7
MSH5-218ENST00000494646 LRRIQ4A6NIV6 560 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 NRP1O14786 923 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 B4GALT5O43286 388 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 CLASP2O75122 1294 aaKnown RBP10.65□□□□□ -0.7
MSH5-218ENST00000494646 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
MSH5-218ENST00000494646 ARF4P18085 180 aaPredicted RBP10.65□□□□□ -0.7
MSH5-218ENST00000494646 NCLP19338 710 aaKnown RBP10.65□□□□□ -0.7
MSH5-218ENST00000494646 AKAP5P24588 427 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 AXLP30530 894 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 TOB1P50616 345 aaPredicted RBP10.65□□□□□ -0.7
MSH5-218ENST00000494646 MBTD1Q05BQ5 628 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 KCNC3Q14003 757 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 AMHR2Q16671 573 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 ANKRD54Q6NXT1 300 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 KANK3Q6NY19 840 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 NOTUMQ6P988 496 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 SYCE2Q6PIF2 218 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 POTEGQ6S5H5 508 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 RNF135Q8IUD6 432 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 NOSTRINQ8IVI9 506 aa10.65□□□□□ -0.7
MSH5-218ENST00000494646 TMEM87AQ8NBN3 555 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms