RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ARHGEF18	Q6ZSZ5	1173 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	PLEKHH3	Q7Z736	793 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	CLEC14A	Q86T13	490 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	TTC9B	Q8N6N2	239 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	PLA2G15	Q8NCC3	412 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	CHMP4C	Q96CF2	233 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	SAMD11	Q96NU1	681 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	PTPN18	Q99952	460 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	JADE2	Q9NQC1	790 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	AASDHPPT	Q9NRN7	309 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	G3BP2	Q9UN86	482 aa	Known RBP	5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	MYRF	Q9Y2G1	1151 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	SLC4A7	Q9Y6M7	1214 aa		5.68	□□□□□ -1.5
RBM39-231	ENST00000477334	PRAMEF4	O60810	478 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	INSRR	P14616	1297 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	BPIFB4	P59827	614 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	PPP2CB	P62714	309 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	PPP2CA	P67775	309 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	MCL1	Q07820	350 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	ADRM1	Q16186	407 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	MBNL2	Q5VZF2	373 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	RAVER1	Q8IY67	606 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	UNC5B	Q8IZJ1	945 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	ANKRD53	Q8N9V6	530 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	HOOK2	Q96ED9	719 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	TEKT5	Q96M29	485 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	LRRC37B	Q96QE4	947 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	SLC13A1	Q9BZW2	595 aa		5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	PUF60	Q9UHX1	559 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	THRAP3	Q9Y2W1	955 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334	LUC7L2	Q9Y383	392 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-231	ENST00000477334		A0A1W2PR48	441 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	MATN2	O00339	956 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	TMEM127	O75204	238 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	TOX4	O94842	621 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	SNUPN	O95149	360 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	ADCY7	P51828	1080 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	RAC3	P60763	192 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	HGFAC	Q04756	655 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	NFYC	Q13952	458 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	ANO4	Q32M45	955 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	KRT40	Q6A162	431 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	BTNL9	Q6UXG8	535 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	ABHD15	Q6UXT9	468 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	MSL3	Q8N5Y2	521 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	JDP2	Q8WYK2	163 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	LPP	Q93052	612 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	FATE1	Q969F0	183 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	NEIL1	Q96FI4	390 aa	Predicted RBP	5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	RPL10L	Q96L21	214 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	LMF1	Q96S06	567 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	DPYSL5	Q9BPU6	564 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	KRTAP3-1	Q9BYR8	98 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	C12orf65	Q9H3J6	166 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	C14orf93	Q9H972	538 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	DMRT3	Q9NQL9	472 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	ING3	Q9NXR8	418 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	KLHL42	Q9P2K6	505 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	ZBTB21	Q9ULJ3	1066 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	ZNF536	O15090	1300 aa		5.66	□□□□□ -1.5
RBM39-231	ENST00000477334	LAMTOR5	O43504	91 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	NDUFS2	O75306	463 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	ALDH1A2	O94788	518 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	C5AR1	P21730	350 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	CTSS	P25774	331 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	KIR2DL3	P43628	341 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	RECQL	P46063	649 aa	Predicted RBP	5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	RAB27A	P51159	221 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	KRT85	P78386	507 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	MALL	Q13021	153 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	UBE3C	Q15386	1083 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	SURF1	Q15526	300 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	MUM1L1	Q5H9M0	696 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	EFCAB2	Q5VUJ9	269 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	SSH1	Q8WYL5	1049 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	RIN2	Q8WYP3	895 aa	Predicted RBP	5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	CFHR4	Q92496	578 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	LOXL4	Q96JB6	756 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	C1QTNF3	Q9BXJ4	246 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	SLC6A15	Q9H2J7	730 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	IP6K2	Q9UHH9	426 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	TUBD1	Q9UJT1	453 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	DNM3	Q9UQ16	869 aa		5.65	□□□□□ -1.5
RBM39-231	ENST00000477334	AKAP10	O43572	662 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	AKR1B10	O60218	316 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	CDC14B	O60729	498 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	LTA4H	P09960	611 aa	Known RBP	5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	GSPT1	P15170	499 aa	Known RBP	5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	EPHB4	P54760	987 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	EPHB1	P54762	984 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	GLB1L	Q6UWU2	654 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	TAS1R1	Q7RTX1	841 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	C8orf49	Q96NF6	230 aa		5.64	□□□□□ -1.51
RBM39-231	ENST00000477334	GNRHR2	Q96P88	292 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms