RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ELAC2Q9BQ52 826 aaKnown RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 TUBGCP2Q9BSJ2 902 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 PCDHA12Q9UN75 941 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 PLAGL2Q9UPG8 496 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 TECPR2O15040 1411 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 EIF4A3P38919 411 aaKnown RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 MESDQ14696 234 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 HLFQ16534 295 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 TEDDM1Q5T9Z0 273 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 WDR75Q8IWA0 830 aaKnown RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 ADSSL1Q8N142 457 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 RYBPQ8N488 228 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 ECT2Q9H8V3 914 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 ZSCAN32Q9NX65 697 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 MYH6P13533 1939 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 ABCC12Q96J65 1359 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 TOM1L1O75674 476 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 RPN1P04843 607 aaKnown RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 CA4P22748 312 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 PPARGP37231 505 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 SGMS1Q86VZ5 419 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 INPP4AQ96PE3 977 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 PXDNQ92626 1479 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 MYH2Q9UKX2 1941 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 ZSCAN9O15535 394 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 SPAG7O75391 227 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 MMEP08473 750 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 IMPDH2P12268 514 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 NCF2P19878 526 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 MAP3K10Q02779 954 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 TJAP1Q5JTD0 557 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 MCF2L2Q86YR7 1114 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 STX19Q8N4C7 294 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 TLCD1Q96CP7 247 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 ZMYND8Q9ULU4 1186 aaPredicted RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 GJA3Q9Y6H8 435 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 DAB1O75553 588 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 SHBGP04278 402 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 DLATP10515 647 aaKnown RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 CHN1P15882 459 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ARL4AP40617 200 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 CUL3Q13618 768 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 SEPT2Q15019 361 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 PTPROQ16827 1216 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 SHISA4Q96DD7 197 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 THAP9Q9H5L6 903 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ZNF408Q9H9D4 720 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 RNF103-CHMP3A0A140T963 221 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ARHGAP10A1A4S6 786 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 IPO5O00410 1097 aaKnown RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 PDHA1P08559 390 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 PLTPP55058 493 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 HDAC4P56524 1084 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 CCDC85BQ15834 202 aaPredicted RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 USH1GQ495M9 461 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 XKR9Q5GH70 373 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ANGPTL8Q6UXH0 198 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 SESTD1Q86VW0 696 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 KIAA2013Q8IYS2 634 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 NT5C1BQ96P26 610 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 STOML1Q9UBI4 398 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 FIS1Q9Y3D6 152 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 SPEF2Q9C093 1822 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 MCF2LO15068 1137 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 PJA2O43164 708 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 HNRNPH3P31942 346 aaKnown RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 MAGEA8P43361 318 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 TRPC1P48995 793 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 RASSF7Q02833 373 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 EIF1ADQ8N9N8 165 aaKnown RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 METTL22Q9BUU2 404 aaPredicted RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ARHGEF3Q9NR81 526 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ATP8A1Q9Y2Q0 1164 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 LRRC42Q9Y546 428 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 EPHB6O15197 1021 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 FTCDO95954 541 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 MRPS35P82673 323 aaKnown RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 EXOC3L4Q17RC7 722 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 GALNTL6Q49A17 601 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 KLC3Q6P597 504 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 EXOC8Q8IYI6 725 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 PDIK1LQ8N165 341 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
U2AF1-209ENST00000475639 STX18Q9P2W9 335 aaKnown RBP12.25□□□□□ -0.45
U2AF1-209ENST00000475639 A0A1W2PQJ5 194 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms