RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZC3H12AQ5D1E8 599 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 TCP11X2Q5H9J9 407 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 JAKMIP3Q5VZ66 844 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 MAP1SQ66K74 1059 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 STYK1Q6J9G0 422 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 AMIGO3Q86WK7 504 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 C2CD5Q86YS7 1000 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 TEX2Q8IWB9 1127 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 RASGRP4Q8TDF6 673 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 TBCKQ8TEA7 893 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 DCAF4Q8WV16 495 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 FBXL18Q96ME1 805 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 PIGSQ96S52 555 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 MRIQ9BWK5 157 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 RIOX1Q9H6W3 641 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 KANSL2Q9H9L4 492 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 RIC8AQ9NPQ8 531 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 MYO1AQ9UBC5 1043 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 ADD3Q9UEY8 706 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 ZC3H7BQ9UGR2 993 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 SAMM50Q9Y512 469 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 SBF2Q86WG5 1849 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 FRMPD2Q68DX3 1309 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 UBR3Q6ZT12 1888 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 A0A1W2PQC6 194 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 LGALS16A8MUM7 142 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ZBTB5O15062 677 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 PLSCR1O15162 318 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 P4HBP07237 508 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 MMP10P09238 476 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 PLCG1P19174 1290 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 CCNE1P24864 410 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 CCT6AP40227 531 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 TXKP42681 527 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 CRKP46108 304 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 MTIF2P46199 727 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 NOVP48745 357 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 DNM2P50570 870 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ADKP55263 362 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ERVK-24P63145 666 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 KRT83P78385 493 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 RBL2Q08999 1139 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ZNF543Q08ER8 600 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 NCBP1Q09161 790 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 PSMD2Q13200 908 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 PDIA5Q14554 519 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 CYP27C1Q4G0S4 372 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 STRIP1Q5VSL9 837 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 HAUS3Q68CZ6 603 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 SLFN12Q8IYM2 578 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ADSSL1Q8N142 457 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 LRRC47Q8N1G4 583 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 CSGALNACT2Q8N6G5 542 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 C4orf32Q8N8J7 132 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 TC2NQ8N9U0 490 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ERMNQ8TAM6 284 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 CPLX3Q8WVH0 158 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 P2RX5Q93086 422 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 SHISA4Q96DD7 197 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ZDHHC15Q96MV8 337 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 C7orf25Q9BPX7 421 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 EHMT1Q9H9B1 1298 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 L2HGDHQ9H9P8 463 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 LRRC4CQ9HCJ2 640 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 KBTBD4Q9NVX7 518 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 TAB2Q9NYJ8 693 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 PI4KBQ9UBF8 816 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 FAM8A1Q9UBU6 413 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 ZNF215Q9UL58 517 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 SYNPO2Q9UMS6 1093 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 LUC7L2Q9Y383 392 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 LRRC37AA6NMS7 1700 aa6.52□□□□□ -1.37
ATPAF1-204ENST00000474020 CTAGE9A4FU28 777 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 LRRC10BA6NIK2 292 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 EFCAB8A8MWE9 144 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 CYTH3O43739 400 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 FOSP01100 380 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 KRT18P05783 430 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 TUBBP07437 444 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 SNHG28P0DPA3 235 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 AKR1B1P15121 316 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 TAL1P17542 331 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 TRIM21P19474 475 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 CASP14P31944 242 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 CYLC1P35663 651 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 TECP42680 631 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 PRCPP42785 496 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 SLC1A4P43007 532 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 LRRC63Q05C16 580 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 GABPAQ06546 454 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 IKQ13123 557 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 CERKLQ49MI3 558 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 COBLL1Q53SF7 1204 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 PPP4R3AQ6IN85 833 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 IQCEQ6IPM2 695 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 CDC42EP5Q6NZY7 148 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms