RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PLEKHA4Q9H4M7 779 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 PXMP2Q9NR77 195 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 PNMA2Q9UL42 364 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 STX8Q9UNK0 236 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 HEMK1Q9Y5R4 338 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-206ENST00000471968 ZBED9Q6R2W3 1325 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 KDM3AQ9Y4C1 1321 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 MUC22E2RYF6 1773 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 PCNX1Q96RV3 2341 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 GAS2O43903 313 aaKnown RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 ZMYND10O75800 440 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 URODP06132 367 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 GALTP07902 379 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 ELAVL4P26378 380 aaKnown RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 ZNF76P36508 570 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 ATXN3P54252 364 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 SEMA3FQ13275 785 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 WDR44Q5JSH3 913 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 TANGO2Q6ICL3 276 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 METTL7BQ6UX53 244 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 TMPRSS7Q7RTY8 843 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 VSIG10LQ86VR7 867 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 NPAS3Q8IXF0 933 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 HDAC7Q8WUI4 952 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 NANOS1Q8WY41 292 aaKnown RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 ING5Q8WYH8 240 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 PIGKQ92643 395 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 IRF7Q92985 503 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 CLUAP1Q96AJ1 413 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 RPS6KC1Q96S38 1066 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 GTPBP2Q9BX10 602 aaKnown RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 CDHR5Q9HBB8 845 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 EVLQ9UI08 416 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 APOBEC2Q9Y235 224 aaKnown RBP7.66□□□□□ -1.18
HDAC3-206ENST00000471968 FRMPD4Q14CM0 1322 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 WDR19Q8NEZ3 1342 aa7.66□□□□□ -1.18
HDAC3-206ENST00000471968 TERTO14746 1132 aaKnown RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 TGM5O43548 720 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 TLX3O43711 291 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 OPHN1O60890 802 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 RHDQ02161 417 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 RNASELQ05823 741 aaKnown RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 OS9Q13438 667 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 KARSQ15046 597 aaKnown RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 TTF1Q15361 905 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 DGKKQ5KSL6 1271 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 ODR4Q5SWX8 454 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 C6orf132Q5T0Z8 1188 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 PDXDC1Q6P996 788 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 BTNL9Q6UXG8 535 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 FAM43BQ6ZT52 329 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 SLCO6A1Q86UG4 719 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 ECHDC2Q86YB7 292 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 CMTR1Q8N1G2 835 aaKnown RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 NEDD1Q8NHV4 660 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 KAT6AQ92794 2004 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 MCRS1Q96EZ8 462 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 MED8Q96G25 268 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 MEIS3Q99687 375 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 TRMT61BQ9BVS5 477 aaKnown RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 FAM117AQ9C073 453 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 GBP3Q9H0R5 595 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 ZNF768Q9H5H4 540 aaKnown RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 ZNF334Q9HCZ1 680 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 FSCN3Q9NQT6 498 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 SEPT9Q9UHD8 586 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-206ENST00000471968 SLC8A2Q9UPR5 921 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 INVSQ9Y283 1065 aa7.65□□□□□ -1.18
HDAC3-206ENST00000471968 ATG2BQ96BY7 2078 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 PLIN4Q96Q06 1357 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 FAM149AA5PLN7 773 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 SH3BP5O60239 455 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 HSPD1P10809 573 aaKnown RBP7.64□□□□□ -1.19
HDAC3-206ENST00000471968 CD59P13987 128 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 GDI1P31150 447 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 SLC11A1P49279 550 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 DHPSP49366 369 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-206ENST00000471968 TFAP4Q01664 338 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 MTX1Q13505 466 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 CAMK2BQ13554 666 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 DSC3Q14574 896 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 MAPK6Q16659 721 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 PMS2CLQ68D20 193 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 PKN3Q6P5Z2 889 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 FAM228AQ86W67 206 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 GLYCTKQ8IVS8 523 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 PDCD7Q8N8D1 485 aaKnown RBP7.64□□□□□ -1.19
HDAC3-206ENST00000471968 DCAF4Q8WV16 495 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 ELSPBP1Q96BH3 223 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 PSMG3-AS1Q96PY0 264 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 PPP1R16BQ96T49 567 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 DNAJC2Q99543 621 aaKnown RBP7.64□□□□□ -1.19
HDAC3-206ENST00000471968 PDCD2LQ9BRP1 358 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 FZD8Q9H461 694 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 NRDE2Q9H7Z3 1164 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 ZNF287Q9HBT7 754 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 DNAJB4Q9UDY4 337 aa7.64□□□□□ -1.19
HDAC3-206ENST00000471968 STK39Q9UEW8 545 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms