RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 AXDND1Q5T1B0 1012 aaPredicted RBP6.21□□□□□ -1.42
VPS41-211ENST00000466017 XRRA1Q6P2D8 792 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 LRFN4Q6PJG9 635 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 MOB2Q70IA6 237 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 ANKRD23Q86SG2 305 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 NEK8Q86SG6 692 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 RIOX2Q8IUF8 465 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 C4orf32Q8N8J7 132 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 SMC1BQ8NDV3 1235 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 CHST13Q8NET6 341 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 CLEC4DQ8WXI8 215 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 FERMT2Q96AC1 680 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 WNK4Q96J92 1243 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 CLMNQ96JQ2 1002 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 PGBD1Q96JS3 809 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 FBXO28Q9NVF7 368 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.21□□□□□ -1.42
VPS41-211ENST00000466017 ZNF214Q9UL59 606 aaPredicted RBP6.21□□□□□ -1.42
VPS41-211ENST00000466017 PCDHA7Q9UN72 937 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 FZD1Q9UP38 647 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 CLIC4Q9Y696 253 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 TRPM7Q96QT4 1865 aa6.21□□□□□ -1.42
VPS41-211ENST00000466017 MANSC4A6NHS7 340 aaPredicted RBP6.2□□□□□ -1.42
VPS41-211ENST00000466017 ADAMTS3O15072 1205 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 FIBPO43427 364 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 TFE3P19532 575 aaPredicted RBP6.2□□□□□ -1.42
VPS41-211ENST00000466017 SPINK2P20155 84 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 SREBF1P36956 1147 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 STAT3P40763 770 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 GCLCP48506 637 aaPredicted RBP6.2□□□□□ -1.42
VPS41-211ENST00000466017 PDIA5Q14554 519 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 RGMBQ6NW40 437 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 LLGL2Q6P1M3 1020 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 PIK3AP1Q6ZUJ8 805 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 SV2BQ7L1I2 683 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 SAPCD2Q86UD0 394 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 SMYD4Q8IYR2 804 aaPredicted RBP6.2□□□□□ -1.42
VPS41-211ENST00000466017 SHCBP1Q8NEM2 672 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 TBCKQ8TEA7 893 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 PIBF1Q8WXW3 757 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 ATG4CQ96DT6 458 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 TIGD1Q96MW7 591 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 P2RX7Q99572 595 aaKnown RBP6.2□□□□□ -1.42
VPS41-211ENST00000466017 TEX13BQ9BXU2 312 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 TANGO6Q9C0B7 1094 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 CEP44Q9C0F1 390 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 EHMT1Q9H9B1 1298 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 FBXO40Q9UH90 709 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 CCPG1Q9ULG6 757 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 CTDP1Q9Y5B0 961 aaPredicted RBP6.2□□□□□ -1.42
VPS41-211ENST00000466017 PCDHB6Q9Y5E3 794 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 DDX49Q9Y6V7 483 aaKnown RBP6.2□□□□□ -1.42
VPS41-211ENST00000466017 PTPRFP10586 1907 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 FRMPD4Q14CM0 1322 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 PARP14Q460N5 1801 aa6.2□□□□□ -1.42
VPS41-211ENST00000466017 MYH15Q9Y2K3 1946 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 GOLGA6L4A6NEF3 574 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 KIAA1324LA8MWY0 1029 aaPredicted RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 GSC2O15499 205 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 MAFGO15525 162 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 COBLO75128 1261 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 LETM1O95202 739 aaPredicted RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 LONP1P36776 959 aaKnown RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 TM4SF4P48230 202 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 IRX3P78415 501 aaPredicted RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 PSMD2Q13200 908 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 TMEM132BQ14DG7 1078 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 CCDC85BQ15834 202 aaPredicted RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 INF2Q27J81 1249 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 Q4G0T1 1027 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 TREML2Q5T2D2 321 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 JAKMIP3Q5VZ66 844 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 NIPA1Q7RTP0 329 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 ENGASEQ8NFI3 743 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 DNERQ8NFT8 737 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 GPT2Q8TD30 523 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 CHAMP1Q96JM3 812 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 AK8Q96MA6 479 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 MTMR9Q96QG7 549 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 PYM1Q9BRP8 204 aaKnown RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 EMILIN2Q9BXX0 1053 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 ANO3Q9BYT9 981 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 CCSER1Q9C0I3 900 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 ASCC2Q9H1I8 757 aaPredicted RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 FBRSQ9HAH7 460 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 RAVER2Q9HCJ3 691 aaKnown RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 PCMTD2Q9NV79 361 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 RBPJLQ9UBG7 517 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 MORF4L1Q9UBU8 362 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 ZC3H7BQ9UGR2 993 aaKnown RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 FBXO2Q9UK22 296 aaPredicted RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 ISY1Q9ULR0 285 aaKnown RBP6.19□□□□□ -1.42
VPS41-211ENST00000466017 HPSEQ9Y251 543 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 RPTORQ8N122 1335 aa6.19□□□□□ -1.42
VPS41-211ENST00000466017 LOC285556D6RIA3 1793 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 OTOFQ9HC10 1997 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 SMCHD1A6NHR9 2005 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 CTAGE5O15320 804 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms