RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 B4GALT5O43286 388 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 ZNF623O75123 536 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 FAM13AO94988 1023 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 PRKCBP05771 671 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 LIG1P18858 919 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 ZNF131P52739 623 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 TAP1Q03518 808 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 DYMQ7RTS9 669 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 MYCT1Q8N699 235 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
SQSTM1-205ENST00000464493 DDX12PQ92771 950 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 CCDC51Q96ER9 411 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 FAM161BQ96MY7 647 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 PYM1Q9BRP8 204 aaKnown RBP16■□□□□ 0.15
SQSTM1-205ENST00000464493 CCDC113Q9H0I3 377 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 ZHX3Q9H4I2 956 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 TMEM134Q9H6X4 195 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 RC3H2Q9HBD1 1191 aaKnown RBP16■□□□□ 0.15
SQSTM1-205ENST00000464493 PARVGQ9HBI0 331 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 CHMP5Q9NZZ3 219 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 ARHGAP28Q9P2N2 729 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 PHLPP2Q6ZVD8 1323 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 LINC01553A4QN01 128 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 SLC16A4O15374 487 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 TBCAO75347 108 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 ARHGEF15O94989 841 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 RAB27AP51159 221 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 PRPF4BQ13523 1007 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 UBXN11Q5T124 520 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 ZNF598Q86UK7 904 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 FIBCD1Q8N539 461 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 RNF169Q8NCN4 708 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 LRRC27Q9C0I9 530 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 TNMDQ9H2S6 317 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 KBTBD4Q9NVX7 518 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
SQSTM1-205ENST00000464493 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 A0A1B0GVL5 298 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 A0A1W2PQ27 194 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 A0A1W2PQ64 194 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 A0A1W2PQD8 194 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 H0YCG3 227 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 HOXA2O43364 376 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 FGFR1P11362 822 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 GATMP50440 423 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 AMPD3Q01432 767 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 BTG3Q14201 252 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 TMEM132AQ24JP5 1023 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 CMTR2Q8IYT2 770 aaKnown RBP15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 TMEM161BQ8NDZ6 487 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 STAMQ92783 540 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 DNAJC19Q96DA6 116 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
SQSTM1-205ENST00000464493 TTLL13PA6NNM8 815 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 TBKBP1A7MCY6 615 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 TRAK2O60296 914 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 EDN1P05305 212 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 MAPTP10636 758 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 PFKFB1P16118 471 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 NCKAP1LP55160 1127 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 GRIN2CQ14957 1233 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 LONRF3Q496Y0 759 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 TPRNQ4KMQ1 711 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 PAN2Q504Q3 1202 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 NT5DC1Q5TFE4 455 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 SLC27A1Q6PCB7 646 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 MRPL10Q7Z7H8 261 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 CDR2LQ86X02 465 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 ABI1Q8IZP0 508 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 CNNM3Q8NE01 707 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 TGS1Q96RS0 853 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 EIF2AQ9BY44 585 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 TRIM6Q9C030 488 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 CERS4Q9HA82 394 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 MAGEF1Q9HAY2 307 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 MTMR10Q9NXD2 777 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 HPSEQ9Y251 543 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 USP20Q9Y2K6 914 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 CHD7Q9P2D1 2997 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 MYO9BQ13459 2157 aa15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 FNDC1Q4ZHG4 1894 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-205ENST00000464493 FAM237AA0A1B0GTK4 181 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 GOLGA6L4A6NEF3 574 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 N4BP3O15049 544 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 IDEP14735 1019 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 SCP2P22307 547 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 SYKP43405 635 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 ERVK-21P61565 698 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 STRN3Q13033 797 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 ATF7IP2Q5U623 682 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 TAS1R3Q7RTX0 852 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 HAUS6Q7Z4H7 955 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 FAM178BQ8IXR5 827 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 CEP57L1Q8IYX8 460 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 FSIP1Q8NA03 581 aa15.96■□□□□ 0.15
SQSTM1-205ENST00000464493 ARNTL2Q8WYA1 636 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms