RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 TIPINQ9BVW5 301 aa22.08■■□□□ 1.13
TUBGCP3-204ENST00000464139 AS3MTQ9HBK9 375 aa22.08■■□□□ 1.13
TUBGCP3-204ENST00000464139 SUCLA2Q9P2R7 463 aaPredicted RBP22.08■■□□□ 1.13
TUBGCP3-204ENST00000464139 ZNF112Q9UJU3 913 aa22.08■■□□□ 1.13
TUBGCP3-204ENST00000464139 PNMA2Q9UL42 364 aa22.08■■□□□ 1.13
TUBGCP3-204ENST00000464139 CCDC66A2RUB6 948 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 ZNF862O60290 1169 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 RGS20O76081 388 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 USP8P40818 1118 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 RFFLQ8WZ73 363 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 CCDC127Q96BQ5 260 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 ZNF214Q9UL59 606 aaPredicted RBP22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 NOC2LQ9Y3T9 749 aaKnown RBP22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 NCANO14594 1321 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 CAPN2P17655 700 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 DSG3P32926 999 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 MXI1P50539 228 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 HNRNPH2P55795 449 aaKnown RBP22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 MAP2K1Q02750 393 aaPredicted RBP22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 TMEM132BQ14DG7 1078 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 KIAA1217Q5T5P2 1943 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 ZNF746Q6NUN9 644 aaPredicted RBP22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 SCFD2Q8WU76 684 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 CAVIN3Q969G5 261 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 CEP170P1Q96L14 293 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 RLFQ13129 1914 aa22.07■■□□□ 1.12
TUBGCP3-204ENST00000464139 DENND3A2RUS2 1198 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 PGRMC1O00264 195 aaKnown RBP22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 RFX1P22670 979 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 SMTNP53814 917 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 DMP1Q13316 513 aaPredicted RBP22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 SNRNP35Q16560 246 aaKnown RBP22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 GPRASP2Q96D09 838 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 IWS1Q96ST2 819 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 POP1Q99575 1024 aaKnown RBP22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.06■■□□□ 1.121e-6■■■□□ 15.4
TUBGCP3-204ENST00000464139 AMFRQ9UKV5 643 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 DOCK5Q9H7D0 1870 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 FZD9O00144 591 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 KCNA2P16389 499 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 CNGA1P29973 690 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 GUCY2FP51841 1108 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 SWSAP1Q6NVH7 229 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 FMNL3Q8IVF7 1028 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 AFAP1L1Q8TED9 768 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 HES6Q96HZ4 224 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 KMT5AQ9NQR1 393 aa22.06■■□□□ 1.12
TUBGCP3-204ENST00000464139 ZNF541Q9H0D2 1346 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 P4HA2O15460 535 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 ITGA4P13612 1032 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 NSUN6Q8TEA1 469 aaKnown RBP22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 WDR81Q562E7 1941 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 PPATQ06203 517 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 PAK2Q13177 524 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 XRRA1Q6P2D8 792 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 DDX47Q9H0S4 455 aaKnown RBP22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 COG5Q9UP83 839 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 EXOC7Q9UPT5 735 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 DAAM1Q9Y4D1 1078 aa22.05■■□□□ 1.12
TUBGCP3-204ENST00000464139 PHIPQ8WWQ0 1821 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 KRIT1O00522 736 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 MAP4K3Q8IVH8 894 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 GOLGA6L1Q8N7Z2 621 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 SEMA4DQ92854 862 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 ELMO3Q96BJ8 720 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 ACP6Q9NPH0 428 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 PFASO15067 1338 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 ANKRD62A6NC57 917 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 MAPK13O15264 365 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 STBD1O95210 358 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 SNRPFP62306 86 aaKnown RBP22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 PRKG1Q13976 671 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 OTUD6AQ7L8S5 288 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 RPUSD2Q8IZ73 545 aaKnown RBP22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 PPM1KQ8N3J5 372 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 RDM1Q8NG50 284 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 TRPM4Q8TD43 1214 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 FBXO41Q8TF61 875 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 SENP7Q9BQF6 1050 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 TOPORSQ9NS56 1045 aaPredicted RBP22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 ADAMTS5Q9UNA0 930 aa22.04■■□□□ 1.12
TUBGCP3-204ENST00000464139 SGPL1O95470 568 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 TAF3Q5VWG9 929 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 SLC39A4Q6P5W5 647 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 RASGEF1CQ8N431 466 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 A1CFQ9NQ94 594 aaKnown RBP22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 CYP39A1Q9NYL5 469 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 ADGRA3Q8IWK6 1321 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 SART1O43290 800 aaKnown RBP22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 FTLP02792 175 aaPredicted RBP22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 ERVK-9P63128 1117 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 ZSCAN26Q16670 478 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 CCDC60Q8IWA6 550 aaPredicted RBP22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 SLC17A8Q8NDX2 589 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 KREMEN1Q96MU8 473 aa22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 CHORDC1Q9UHD1 332 aaPredicted RBP22.03■■□□□ 1.12
TUBGCP3-204ENST00000464139 MAFGO15525 162 aa22.02■■□□□ 1.12
TUBGCP3-204ENST00000464139 PARD3BQ8TEW8 1205 aa22.02■■□□□ 1.12
TUBGCP3-204ENST00000464139 ATP6V0A1Q93050 837 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms