RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KPNA6O60684 536 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 N4BP1O75113 896 aaKnown RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 HMMRO75330 724 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMCC1O94876 653 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 TIAF1O95411 115 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 BAG3O95817 575 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 SCGB1D2O95969 90 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 SCG5P05408 212 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 MSL3P1P0C860 447 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 JMJD7P0C870 316 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ITGA4P13612 1032 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 DRD2P14416 443 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 BPIP17213 487 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 RXRBP28702 533 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ALDH3A1P30838 453 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 HOXC12P31275 282 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 IREB2P48200 963 aaKnown RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCT5P48643 541 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CD97P48960 835 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 RNF4P78317 190 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 GPSM2P81274 684 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 PLOD1Q02809 727 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 WHAMMP3Q1A5X7 153 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC14Q49A88 953 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 SMUG1Q53HV7 270 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 MAMDC2Q7Z304 686 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ARMC9Q7Z3E5 817 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMEM110Q86TL2 294 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 SAPCD2Q86UD0 394 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CHD1LQ86WJ1 897 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ANKLE2Q86XL3 938 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 RNF168Q8IYW5 571 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 LSMEM2Q8N112 164 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 THEMISQ8N1K5 641 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 MYO1HQ8N1T3 1032 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ANKRD44Q8N8A2 993 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ADCY4Q8NFM4 1077 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 PPP1R14CQ8TAE6 165 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 SYTL5Q8TDW5 730 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 MORC4Q8TE76 937 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 NUP133Q8WUM0 1156 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 KCTD13Q8WZ19 329 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 RUBCNQ92622 972 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 BRF1Q92994 677 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 GCC1Q96CN9 775 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 OPTNQ96CV9 577 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 C1orf159Q96HA4 380 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 NAF1Q96HR8 494 aaKnown RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CHAMP1Q96JM3 812 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 SNX27Q96L92 541 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 FBXL18Q96ME1 805 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC140Q96MF4 163 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 KREMEN1Q96MU8 473 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 NAP1L3Q99457 506 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 TSC22D3Q99576 134 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 SH3GL1Q99961 368 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ORAI3Q9BRQ5 295 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC28BQ9BUN5 200 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CARD6Q9BX69 1037 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 PUS7LQ9H0K6 701 aaKnown RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC8Q9H0W5 538 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 RNF208Q9H0X6 261 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 NKX2-4Q9H2Z4 354 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 KAT14Q9H8E8 782 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 CYP4F12Q9HCS2 524 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 DMAP1Q9NPF5 467 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ATP8A2Q9NTI2 1148 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 EXOC1Q9NV70 894 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZIM2Q9NZV7 527 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 RABL2BQ9UNT1 228 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZNF148Q9UQR1 794 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 TBC1D30Q9Y2I9 924 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 DIS3Q9Y2L1 958 aaKnown RBP3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 ATP6V0A2Q9Y487 856 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 TIMM22Q9Y584 194 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 NR2E3Q9Y5X4 410 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 MAST1Q9Y2H9 1570 aa3.97□□□□□ -1.77
HMGB3P8-201ENST00000449709 PTCH1Q13635 1447 aa3.96□□□□□ -1.77
HMGB3P8-201ENST00000449709 PRAG1Q86YV5 1406 aa3.96□□□□□ -1.77
HMGB3P8-201ENST00000449709 A0A1B0GVG6 124 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TARSL2A2RTX5 802 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 RASSF10A6NK89 507 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 LRRIQ3A6PVS8 624 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 TBKBP1A7MCY6 615 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 BTBD19C9JJ37 291 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 AGPSO00116 658 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 NEMP1O14524 444 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 STRNO43815 780 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 HYAL3O43820 417 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CUTAO60888 179 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 RNGTTO60942 597 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 GFPT2O94808 682 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 KCNH1O95259 989 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ATP6V1G2O95670 118 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 GSTA1P08263 222 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PARP1P09874 1014 aaKnown RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 U2AF1L5P0DN76 240 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 PDHBP11177 359 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 CPA3P15088 417 aa3.96□□□□□ -1.78
HMGB3P8-201ENST00000449709 ALOX15P16050 662 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms